Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_5809: 14177 - KOG2979 Protein involved in DNA repair, at 988329 to 990216 14177 mRNA_5810: 14178 - K02730 PSMA6 20S proteasome subunit alpha 1, at 990467 to 991553 14178 mRNA_5811: 14179 - K01599 hemE, UROD uroporphyrinogen decarboxylase, at 992194 to 993567 14179 mRNA_5812: 14180 - K02831 RAD53 ser/thr/tyr protein kinase RAD53, at 993823 to 996800 14180 mRNA_5813: 14181 - K15340 DCLRE1A, SNM1A, PSO2 DNA cross-link repair 1A protein, at 996990 to 1000538 14181
Group Condition mRNA_5809 mRNA_5810 mRNA_5811 mRNA_5812 mRNA_5813
14177
14178
14179
14180
14181
growth on oleic acid YNB Oleic Acid -0.7     -0.1 -0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.4     -0.4 0.0
growth on ricinoleic acid YNB Ricinoleic Acid -0.4     -0.3 0.0
growth on ricinoleic acid YNB Methylricinoleic Acid -0.3     -0.2 -0.1
ypd buoyancy 40 hrs Median Buoyancy -0.5     -0.1 0.0
growth on ypd YPD -0.7     -0.1 0.4
auxotrophy YNB Glucose 75mM Arginine 0.1     -0.5 -0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.1     -0.4 -0.1
auxotrophy Dropout Complete -0.1     -0.4 0.2
ypd buoyancy 40 hrs Low Buoyancy -0.2     -0.1 -0.0
ypd buoyancy 40 hrs High Buoyancy 0.3     -0.0 -0.4
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.2     -0.1 0.2
growth on ricinoleic acid YNB Glucose -0.1     -0.2 0.2
facs on lipid accumulation Sorted No BODIPY Gate 0.3     -0.1 -0.2
ypd buoyancy 40 hrs No Buoyancy Separation -0.0     0.3 -0.3
auxotrophy YNB Glucose 0.2     -0.3 0.1
auxotrophy YNB Glucose 75mM Methionine 0.6     -0.4 -0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.1     0.1 0.1
facs on lipid accumulation Sorted Low BODIPY Gate 0.5     0.0 -0.4
growth on oleic acid YNB Glucose 0.2     0.0 0.1
facs on lipid accumulation Sorted High BODIPY Gate 1.3     -0.1 -0.2
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