Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_5808: 14176 - HMMPfam-Cytochrome oxidase complex assembly protein 1-PF08695, at 987558 to 988212 14176 mRNA_5809: 14177 - KOG2979 Protein involved in DNA repair, at 988329 to 990216 14177 mRNA_5810: 14178 - K02730 PSMA6 20S proteasome subunit alpha 1, at 990467 to 991553 14178 mRNA_5811: 14179 - K01599 hemE, UROD uroporphyrinogen decarboxylase, at 992194 to 993567 14179 mRNA_5812: 14180 - K02831 RAD53 ser/thr/tyr protein kinase RAD53, at 993823 to 996800 14180
Group Condition mRNA_5808 mRNA_5809 mRNA_5810 mRNA_5811 mRNA_5812
14176
14177
14178
14179
14180
growth on ricinoleic acid YNB Methylricinoleic Acid -2.0 -0.3     -0.2
growth on ricinoleic acid YNB Ricinoleic Acid -1.4 -0.4     -0.3
growth on oleic acid YNB Oleic Acid -0.3 -0.7     -0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.8 -0.2     -0.1
ypd buoyancy 40 hrs No Buoyancy Separation -1.0 -0.0     0.3
ypd buoyancy 40 hrs Median Buoyancy -0.1 -0.5     -0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.3 0.1     -0.4
ypd buoyancy 40 hrs Low Buoyancy -0.3 -0.2     -0.1
facs on lipid accumulation Sorted Low BODIPY Gate -1.1 0.5     0.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.6 -0.4     -0.4
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.2 -0.1     0.1
growth on ypd YPD 0.7 -0.7     -0.1
growth on ricinoleic acid YNB Glucose 0.2 -0.1     -0.2
facs on lipid accumulation Sorted No BODIPY Gate 0.0 0.3     -0.1
ypd buoyancy 40 hrs High Buoyancy 0.0 0.3     -0.0
growth on oleic acid YNB Glucose 0.1 0.2     0.0
auxotrophy Dropout Complete 1.1 -0.1     -0.4
auxotrophy YNB Glucose 1.0 0.2     -0.3
auxotrophy YNB Glucose 75mM Arginine 1.3 0.1     -0.5
auxotrophy YNB Glucose 75mM Methionine 1.0 0.6     -0.4
facs on lipid accumulation Sorted High BODIPY Gate -0.0 1.3     -0.1
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