Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_5807: 14175 - HMMPfam-Protein of unknown function (DUF2638)-PF10937, at 986328 to 987350 14175 mRNA_5808: 14176 - HMMPfam-Cytochrome oxidase complex assembly protein 1-PF08695, at 987558 to 988212 14176 mRNA_5809: 14177 - KOG2979 Protein involved in DNA repair, at 988329 to 990216 14177 mRNA_5810: 14178 - K02730 PSMA6 20S proteasome subunit alpha 1, at 990467 to 991553 14178 mRNA_5811: 14179 - K01599 hemE, UROD uroporphyrinogen decarboxylase, at 992194 to 993567 14179
Group Condition mRNA_5807 mRNA_5808 mRNA_5809 mRNA_5810 mRNA_5811
14175
14176
14177
14178
14179
growth on ricinoleic acid YNB Ricinoleic Acid -1.5 -1.4 -0.4    
facs on lipid accumulation Sorted Low BODIPY Gate -2.3 -1.1 0.5    
growth on ricinoleic acid YNB Methylricinoleic Acid 0.4 -2.0 -0.3    
ypd buoyancy 40 hrs Low Buoyancy -0.4 -0.3 -0.2    
facs on lipid accumulation Sorted No BODIPY Gate -1.0 0.0 0.3    
ypd buoyancy 40 hrs Median Buoyancy -0.1 -0.1 -0.5    
facs on lipid accumulation Sorted High BODIPY Gate -1.8 -0.0 1.3    
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.6 -0.8 -0.2    
growth on oleic acid YNB Oleic Acid 1.0 -0.3 -0.7    
growth on oleic acid YNB Glucose 0.1 0.1 0.2    
growth on ypd YPD 0.5 0.7 -0.7    
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.9 -0.2 -0.1    
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.9 -0.3 0.1    
ypd buoyancy 40 hrs High Buoyancy 0.5 0.0 0.3    
ypd buoyancy 40 hrs No Buoyancy Separation 1.8 -1.0 -0.0    
growth on ricinoleic acid YNB Glucose 0.7 0.2 -0.1    
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.8 0.6 -0.4    
auxotrophy Dropout Complete 0.4 1.1 -0.1    
auxotrophy YNB Glucose 75mM Arginine 0.3 1.3 0.1    
auxotrophy YNB Glucose 75mM Methionine 0.3 1.0 0.6    
auxotrophy YNB Glucose 1.1 1.0 0.2    
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