Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_5797: 14165 - HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701, at 962183 to 965371 14165 mRNA_5798: 14166 - KOG3433 Protein involved in meiotic recombination/predicted coiled-coil protein, at 965628 to 966973 14166 mRNA_5799: 14167 - K09540 SEC63, DNAJC23 translocation protein SEC63, at 967190 to 969688 14167 mRNA_5800: 14168 - K11801 WDR23 WD repeat-containing protein 23, at 970023 to 972593 14168 mRNA_5801: 14169 - HMMPfam-Helix-loop-helix DNA-binding domain-PF00010,ProSiteProfiles-Myc-type, basic helix-loop-helix (bHLH) domain profile.-PS50888,SMART-helix loop helix domain-SM00353,SUPERFAMILY--SSF47459, at 972859 to 974663 14169
Group Condition mRNA_5797 mRNA_5798 mRNA_5799 mRNA_5800 mRNA_5801
14165
14166
14167
14168
14169
facs on lipid accumulation Sorted Low BODIPY Gate 0.5 -0.1   -0.2 -1.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.2 -0.2   -0.2 -0.1
growth on ypd YPD -0.4 -0.0   -0.0 -0.1
growth on oleic acid YNB Oleic Acid -0.4 0.2   0.2 -0.4
facs on lipid accumulation Sorted No BODIPY Gate -0.1 -0.0   -0.2 0.0
auxotrophy YNB Glucose -0.1 0.1   -0.2 0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.0 -0.1   0.3 -0.0
ypd buoyancy 40 hrs Median Buoyancy -0.1 0.1   0.1 0.0
ypd buoyancy 40 hrs Low Buoyancy 0.0 0.2   0.0 0.0
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.8 -0.2   -0.2 -0.0
growth on oleic acid YNB Glucose 0.2 -0.1   0.1 0.2
auxotrophy YNB Glucose 75mM Arginine -0.1 0.3   0.1 0.2
facs on lipid accumulation Sorted High BODIPY Gate 0.1 -0.1   0.0 0.4
ypd buoyancy 40 hrs High Buoyancy -0.1 0.6   0.1 -0.1
auxotrophy Dropout Complete -0.1 0.5   0.1 0.1
ypd buoyancy 40 hrs No Buoyancy Separation 0.5 0.4   0.2 -0.4
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.9 -0.0   -0.2 -0.0
growth on ricinoleic acid YNB Ricinoleic Acid 0.4 0.3   -0.2 0.1
growth on ricinoleic acid YNB Glucose 0.3 0.4   -0.0 0.0
auxotrophy YNB Glucose 75mM Methionine 0.1 0.3   0.2 0.2
growth on ricinoleic acid YNB Methylricinoleic Acid 0.4 0.5   -0.1 -0.0
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