Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_5794: 14162 - K01637 E4.1.3.1, aceA isocitrate lyase, at 955473 to 957559 14162 mRNA_5795: 14163 - KOG4842 Protein involved in sister chromatid separation and/or segregation, at 957855 to 959394 14163 mRNA_5796: 14164 - BLAST Protein of unknown function DUF4598 [Xanthophyllomyce..., at 959375 to 960569 14164 mRNA_5797: 14165 - HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701, at 962183 to 965371 14165 mRNA_5798: 14166 - KOG3433 Protein involved in meiotic recombination/predicted coiled-coil protein, at 965628 to 966973 14166
Group Condition mRNA_5794 mRNA_5795 mRNA_5796 mRNA_5797 mRNA_5798
14162
14163
14164
14165
14166
facs on lipid accumulation Sorted High BODIPY Gate -1.0 -0.4 0.1 0.1 -0.1
ypd buoyancy 40 hrs Low Buoyancy -0.7 -0.4 -0.1 0.0 0.2
growth on oleic acid YNB Oleic Acid -0.6 -0.0 -0.1 -0.4 0.2
facs on lipid accumulation Sorted No BODIPY Gate -0.1 0.2 -0.4 -0.1 -0.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.2 -0.1 -0.1 -0.2 -0.2
growth on oleic acid YNB Glucose -0.1 -0.2 -0.1 0.2 -0.1
ypd buoyancy 40 hrs No Buoyancy Separation -0.4 -0.3 -0.4 0.5 0.4
growth on ypd YPD -0.1 0.2 0.2 -0.4 -0.0
auxotrophy YNB Glucose 0.3 -0.5 0.2 -0.1 0.1
ypd buoyancy 40 hrs Median Buoyancy -0.0 -0.0 -0.0 -0.1 0.1
auxotrophy Dropout Complete 0.3 -0.5 -0.1 -0.1 0.5
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.4 -0.2 0.0 0.8 -0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.1 -0.0 0.2 -0.0 -0.1
ypd buoyancy 40 hrs High Buoyancy -0.3 0.1 -0.1 -0.1 0.6
growth on ricinoleic acid YNB Methylricinoleic Acid -1.1 -0.0 0.4 0.4 0.5
auxotrophy YNB Glucose 75mM Methionine -0.1 -0.3 0.4 0.1 0.3
auxotrophy YNB Glucose 75mM Arginine 0.4 -0.2 0.3 -0.1 0.3
facs on lipid accumulation Sorted Low BODIPY Gate 0.9 0.0 -0.4 0.5 -0.1
growth on ricinoleic acid YNB Ricinoleic Acid -0.6 0.5 0.3 0.4 0.3
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.3 -0.3 0.2 0.9 -0.0
growth on ricinoleic acid YNB Glucose 0.1 0.1 0.2 0.3 0.4
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