Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_5776: 14144 - HMMPfam-Phosphatidylinositol-specific phospholipase C, X domain-PF00388,ProSiteProfiles-Phosphatidylinositol-specific phospholipase X-box domain profile.-PS50007,SUPERFAMILY--SSF51695, at 920137 to 921765 14144 mRNA_5777: 14145 - Hypothetical Protein, at 921951 to 922623 14145 mRNA_5778: 14146 - HMMPfam-bZIP transcription factor-PF00170,HMMPfam-Transcription factor PAP1-PF08601,ProSitePatterns-Basic-leucine zipper (bZIP) domain signature.-PS00036,ProSiteProfiles-Basic-leucine zipper (bZIP) domain profile.-PS50217,SMART-basic region leucin zipper-SM00338,SUPERFAMILY--SSF111430,SUPERFAMILY--SSF57959, at 923190 to 924639 14146 mRNA_5779: 14147 - K14848 RRB1, GRWD1 ribosome assembly protein RRB1, at 925113 to 926759 14147 mRNA_5780: 14148 - KOG2989 Uncharacterized conserved protein, at 927066 to 928208 14148
Group Condition mRNA_5776 mRNA_5777 mRNA_5778 mRNA_5779 mRNA_5780
14144
14145
14146
14147
14148
ypd buoyancy 40 hrs No Buoyancy Separation -0.1 0.3 -1.5    
growth on ricinoleic acid YNB Ricinoleic Acid -0.7 -0.1 -0.2    
growth on ricinoleic acid YNB Methylricinoleic Acid -0.5 -0.2 -0.1    
ypd buoyancy 40 hrs Low Buoyancy 0.0 -0.3 -0.2    
facs on lipid accumulation Sorted High BODIPY Gate -0.1 0.1 -0.4    
growth on ypd YPD 0.2 -0.2 -0.2    
ypd buoyancy 40 hrs Median Buoyancy 0.2 -0.2 -0.1    
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.1 0.1 -0.1    
ypd buoyancy 40 hrs High Buoyancy 0.2 -0.1 -0.0    
auxotrophy YNB Glucose 75mM Arginine -0.0 0.3 -0.1    
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.1 0.2 -0.1    
facs on lipid accumulation Sorted Low BODIPY Gate 0.0 0.5 -0.1    
growth on oleic acid YNB Oleic Acid 0.0 0.2 0.3    
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.1 0.5 0.4    
growth on ricinoleic acid YNB Glucose 0.2 0.3 0.3    
auxotrophy YNB Glucose 75mM Methionine -0.0 0.6 0.3    
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.5 0.3 0.2    
auxotrophy Dropout Complete -0.1 0.4 0.8    
growth on oleic acid YNB Glucose 0.4 0.3 0.4    
auxotrophy YNB Glucose 0.1 0.5 0.6    
facs on lipid accumulation Sorted No BODIPY Gate 0.2 0.3 0.7    
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