Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_5770: 14138 - K15171 SUPT4H1, SPT4 transcription elongation factor SPT4, at 904277 to 904949 14138 mRNA_5771: 14139 - K00921 PIKFYVE, FAB1 1-phosphatidylinositol-3-phosphate 5-kinase, at 905200 to 913412 14139 mRNA_5772: 14140 - BLAST m serotype precursor [Moniliophthora roreri MCA 2..., at 913489 to 916106 14140 mRNA_5773: 14141 - Hypothetical Protein, at 916684 to 917418 14141 mRNA_5774: 14142 - K11982 RNF115_126 E3 ubiquitin-protein ligase RNF115/126, at 918001 to 918584 14142
Group Condition mRNA_5770 mRNA_5771 mRNA_5772 mRNA_5773 mRNA_5774
14138
14139
14140
14141
14142
facs on lipid accumulation Sorted Low BODIPY Gate -1.6 -0.4 -0.7 -0.1 -0.2
growth on ricinoleic acid YNB Ricinoleic Acid -0.0 -0.4 -0.5 -1.1 0.5
auxotrophy Dropout Complete -0.7 0.1 -0.6 -0.2 0.8
growth on ricinoleic acid YNB Methylricinoleic Acid -0.1 -0.2 -0.1 -0.9 0.8
facs on lipid accumulation Sorted No BODIPY Gate -0.4 -0.0 0.1 0.3 -0.5
growth on ypd YPD -0.3 -0.4 -0.6 0.6 0.3
growth on oleic acid YNB Oleic Acid 0.0 0.2 -0.4 -0.4 0.4
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.5 -0.3 0.1 -0.2 -0.2
facs on lipid accumulation Sorted High BODIPY Gate 0.5 -0.1 0.0 0.2 -0.5
auxotrophy YNB Glucose 75mM Arginine 0.3 -0.1 -0.1 -0.2 0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.0 0.0 0.0 -0.0 0.0
auxotrophy YNB Glucose 0.1 0.1 0.3 -0.2 -0.1
growth on oleic acid YNB Glucose 0.3 0.1 -0.1 -0.1 0.1
auxotrophy YNB Glucose 75mM Methionine 0.1 0.4 0.0 -0.0 0.0
buoyancy on lipid accumulation 40 hrs High Buoyancy 1.3 -0.1 0.2 -0.5 0.1
growth on ricinoleic acid YNB Glucose 0.7 0.1 0.2 -0.3 0.3
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.4 0.3 0.3 -0.2 0.2
ypd buoyancy 40 hrs High Buoyancy 0.8 0.1 0.3 0.3 0.0
ypd buoyancy 40 hrs Low Buoyancy 0.5 0.1 0.2 0.3 0.5
ypd buoyancy 40 hrs Median Buoyancy 0.4 0.0 0.6 0.3 0.5
ypd buoyancy 40 hrs No Buoyancy Separation 0.8 -0.5 0.4 0.2 0.9
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