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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_5761: 14129 - K14997 SLC38A11 solute carrier family 38 (sodium-coupled neutral amino acid transporter), member 11, at 881466 to 883589
14129
mRNA_5762: 14130 - SUPERFAMILY--SSF47095, at 884263 to 884826
14130
mRNA_5763: 14131 - HMMPfam-Lactonase, 7-bladed beta-propeller-PF10282,SUPERFAMILY--SSF51004, at 884981 to 886323
14131
mRNA_5764: 14132 - K07404 pgl 6-phosphogluconolactonase, at 886498 to 887807
14132
mRNA_5765: 14133 - Interpro Promethin, at 888017 to 888883
14133
Group
Condition
mRNA_5761
mRNA_5762
mRNA_5763
mRNA_5764
mRNA_5765
14129
14130
14131
14132
14133
growth on oleic acid
YNB Oleic Acid
0.3
-0.8
-0.1
-0.1
-0.1
growth on ricinoleic acid
YNB Glucose
0.2
-1.2
0.0
0.0
0.3
growth on ricinoleic acid
YNB Ricinoleic Acid
0.3
-0.8
0.0
-0.0
0.3
growth on ricinoleic acid
YNB Methylricinoleic Acid
0.2
-0.6
-0.0
-0.2
0.4
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.3
0.0
0.1
0.1
-0.1
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.2
-0.9
-0.1
0.3
0.8
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.2
-1.0
-0.0
-0.2
1.4
ypd buoyancy
40 hrs Median Buoyancy
0.0
-0.1
0.1
0.1
-0.1
auxotrophy
Dropout Complete
0.2
-0.5
-0.1
-0.2
0.7
auxotrophy
YNB Glucose
0.2
-0.3
0.1
-0.0
0.2
facs on lipid accumulation
Sorted High BODIPY Gate
0.1
-0.0
0.2
-0.3
0.2
ypd buoyancy
40 hrs Low Buoyancy
0.1
0.2
-0.1
0.4
-0.3
facs on lipid accumulation
Sorted No BODIPY Gate
0.3
0.1
-0.0
-0.0
-0.0
auxotrophy
YNB Glucose 75mM Arginine
0.3
-0.2
-0.0
0.1
0.3
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.1
-0.3
0.1
-0.2
1.0
auxotrophy
YNB Glucose 75mM Methionine
0.1
0.2
0.1
-0.1
0.3
growth on oleic acid
YNB Glucose
0.3
-0.2
0.1
0.1
0.1
ypd buoyancy
40 hrs No Buoyancy Separation
0.3
0.7
0.2
-0.0
-0.7
ypd buoyancy
40 hrs High Buoyancy
0.2
0.2
0.0
0.2
0.0
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.1
-0.2
-0.1
-0.0
1.2
growth on ypd
YPD
-0.1
0.6
-0.0
0.1
0.4
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