Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_5755: 14123 - HMMPfam-PB1 domain-PF00564,SUPERFAMILY--SSF54277, at 868685 to 870428 14123 mRNA_5756: 14124 - HMMPfam-Myb-like DNA-binding domain-PF00249,ProSiteProfiles-Myb-like domain profile.-PS50090,ProSiteProfiles-Myb-type HTH DNA-binding domain profile.-PS51294,SMART-SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains-SM00717,SUPERFAMILY--SSF46689, at 870782 to 872057 14124 mRNA_5757: 14125 - HMMPfam-Glycosyl hydrolase catalytic core-PF11790,SUPERFAMILY--SSF51445, at 872220 to 874136 14125 mRNA_5758: 14126 - K00627 DLAT, aceF, pdhC pyruvate dehydrogenase E2 component (dihydrolipoamide acetyltransferase), at 874421 to 875943 14126 mRNA_5759: 14127 - K14769 UTP11 U3 small nucleolar RNA-associated protein 11, at 876806 to 878161 14127
Group Condition mRNA_5755 mRNA_5756 mRNA_5757 mRNA_5758 mRNA_5759
14123
14124
14125
14126
14127
facs on lipid accumulation Sorted High BODIPY Gate 0.5 -0.8 -0.4    
ypd buoyancy 40 hrs Median Buoyancy -0.1 -0.7 0.2    
facs on lipid accumulation Sorted Low BODIPY Gate 0.3 -1.1 0.2    
facs on lipid accumulation Sorted No BODIPY Gate 0.2 -0.5 -0.2    
auxotrophy YNB Glucose 75mM Methionine 0.1 -0.6 0.0    
auxotrophy YNB Glucose 0.3 -0.6 -0.1    
auxotrophy Dropout Complete 0.0 -0.4 0.0    
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.4 0.4 -0.3    
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.1 0.1 -0.4    
growth on oleic acid YNB Oleic Acid 0.1 -0.2 -0.1    
growth on ricinoleic acid YNB Ricinoleic Acid 0.5 -0.2 -0.3    
auxotrophy YNB Glucose 75mM Arginine 0.1 -0.4 0.3    
ypd buoyancy 40 hrs Low Buoyancy -0.1 0.1 -0.0    
ypd buoyancy 40 hrs High Buoyancy -0.1 0.2 -0.0    
growth on ricinoleic acid YNB Methylricinoleic Acid 0.4 -0.3 -0.1    
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.1 0.5 -0.3    
growth on oleic acid YNB Glucose 0.2 -0.1 0.0    
growth on ricinoleic acid YNB Glucose 0.6 -0.2 -0.1    
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.1 0.4 -0.2    
growth on ypd YPD 0.3 0.6 0.1    
ypd buoyancy 40 hrs No Buoyancy Separation -0.0 1.2 0.1    
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