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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_5739: 14107 - K05692 ACTB_G1 actin beta/gamma 1, at 818147 to 820488
14107
mRNA_5740: 14108 - K00121 frmA, ADH5, adhC S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase, at 820937 to 822719
14108
mRNA_5741: 14109 - K00121 frmA, ADH5, adhC S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase, at 823923 to 825708
14109
mRNA_5742: 14110 - BLAST spindle pole body protein [Moesziomyces antarcticus T..., at 827493 to 828317
14110
mRNA_5743: 14111 - K05672 ABCC12 ATP-binding cassette, subfamily C (CFTR/MRP), member 12, at 828542 to 833992
14111
Group
Condition
mRNA_5739
mRNA_5740
mRNA_5741
mRNA_5742
mRNA_5743
14107
14108
14109
14110
14111
ypd buoyancy
40 hrs No Buoyancy Separation
-0.3
-0.6
0.2
auxotrophy
Dropout Complete
-0.1
-0.8
0.2
auxotrophy
YNB Glucose 75mM Arginine
-0.4
-0.3
0.1
ypd buoyancy
40 hrs Low Buoyancy
-0.0
-0.5
-0.1
auxotrophy
YNB Glucose
-0.2
-0.2
0.1
auxotrophy
YNB Glucose 75mM Methionine
-0.2
-0.1
0.2
facs on lipid accumulation
Sorted Low BODIPY Gate
0.2
-0.2
-0.0
buoyancy on lipid accumulation
40 hrs High Buoyancy
0.3
-0.1
-0.2
ypd buoyancy
40 hrs Median Buoyancy
0.3
-0.2
-0.0
ypd buoyancy
40 hrs High Buoyancy
0.2
-0.1
-0.0
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.7
0.7
0.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
0.3
0.1
-0.3
growth on oleic acid
YNB Glucose
-0.1
0.3
0.1
growth on ypd
YPD
0.2
0.1
0.1
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.0
0.3
0.1
growth on ricinoleic acid
YNB Glucose
0.3
0.2
-0.0
facs on lipid accumulation
Sorted High BODIPY Gate
0.2
0.3
0.1
growth on oleic acid
YNB Oleic Acid
0.2
0.4
0.1
growth on ricinoleic acid
YNB Methylricinoleic Acid
0.3
0.5
0.0
growth on ricinoleic acid
YNB Ricinoleic Acid
0.2
0.3
0.4
facs on lipid accumulation
Sorted No BODIPY Gate
0.4
0.7
0.1
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