Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_5736: 14104 - K03250 EIF3E, INT6 translation initiation factor 3 subunit E, at 812074 to 813868 14104 mRNA_5737: 14105 - HMMPfam-Arsenite-resistance protein 2-PF04959,ProSitePatterns-Zinc finger C2H2 type domain signature.-PS00028,ProSiteProfiles-Zinc finger C2H2 type domain profile.-PS50157, at 814354 to 815055 14105 mRNA_5738: 14106 - SUPERFAMILY--SSF54928, at 815382 to 817330 14106 mRNA_5739: 14107 - K05692 ACTB_G1 actin beta/gamma 1, at 818147 to 820488 14107 mRNA_5740: 14108 - K00121 frmA, ADH5, adhC S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase, at 820937 to 822719 14108
Group Condition mRNA_5736 mRNA_5737 mRNA_5738 mRNA_5739 mRNA_5740
14104
14105
14106
14107
14108
growth on oleic acid YNB Oleic Acid   -1.7 -1.4   0.2
growth on ricinoleic acid YNB Methylricinoleic Acid   -1.6 -1.5   0.3
facs on lipid accumulation Sorted High BODIPY Gate   -2.1 -0.8   0.2
growth on ricinoleic acid YNB Ricinoleic Acid   -1.1 -1.7   0.2
auxotrophy Dropout Complete   -0.9 -1.4   -0.1
auxotrophy YNB Glucose 75mM Methionine   -0.7 -1.3   -0.2
auxotrophy YNB Glucose 75mM Arginine   -0.8 -0.9   -0.4
auxotrophy YNB Glucose   -0.8 -0.8   -0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy   -1.0 -1.0   0.3
growth on oleic acid YNB Glucose   -0.6 -0.9   -0.1
facs on lipid accumulation Sorted Low BODIPY Gate   -1.1 -0.2   0.2
facs on lipid accumulation Sorted No BODIPY Gate   -0.8 -0.6   0.4
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation   -0.4 0.2   -0.7
growth on ricinoleic acid YNB Glucose   -0.4 -0.5   0.3
buoyancy on lipid accumulation 40 hrs Median Buoyancy   -0.4 0.0   -0.0
ypd buoyancy 40 hrs Low Buoyancy   -0.4 0.2   -0.0
ypd buoyancy 40 hrs High Buoyancy   -0.2 0.1   0.2
ypd buoyancy 40 hrs Median Buoyancy   0.7 0.2   0.3
growth on ypd YPD   2.1 -1.0   0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy   0.8 0.5   0.3
ypd buoyancy 40 hrs No Buoyancy Separation   1.0 1.2   -0.3
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