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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_5734: 14102 - K01183 E3.2.1.14 chitinase, at 805175 to 807034
14102
mRNA_5735: 14103 - K12828 SF3B1, SAP155 splicing factor 3B subunit 1, at 807499 to 811509
14103
mRNA_5736: 14104 - K03250 EIF3E, INT6 translation initiation factor 3 subunit E, at 812074 to 813868
14104
mRNA_5737: 14105 - HMMPfam-Arsenite-resistance protein 2-PF04959,ProSitePatterns-Zinc finger C2H2 type domain signature.-PS00028,ProSiteProfiles-Zinc finger C2H2 type domain profile.-PS50157, at 814354 to 815055
14105
mRNA_5738: 14106 - SUPERFAMILY--SSF54928, at 815382 to 817330
14106
Group
Condition
mRNA_5734
mRNA_5735
mRNA_5736
mRNA_5737
mRNA_5738
14102
14103
14104
14105
14106
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.6
-1.1
-1.7
growth on oleic acid
YNB Oleic Acid
-0.1
-1.7
-1.4
facs on lipid accumulation
Sorted High BODIPY Gate
0.1
-2.1
-0.8
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.8
-1.1
-0.2
growth on ricinoleic acid
YNB Methylricinoleic Acid
1.0
-1.6
-1.5
facs on lipid accumulation
Sorted No BODIPY Gate
-0.5
-0.8
-0.6
growth on oleic acid
YNB Glucose
0.1
-0.6
-0.9
buoyancy on lipid accumulation
40 hrs Low Buoyancy
0.7
-1.0
-1.0
auxotrophy
Dropout Complete
1.2
-0.9
-1.4
growth on ricinoleic acid
YNB Glucose
0.1
-0.4
-0.5
auxotrophy
YNB Glucose 75mM Arginine
1.1
-0.8
-0.9
auxotrophy
YNB Glucose 75mM Methionine
1.4
-0.7
-1.3
ypd buoyancy
40 hrs High Buoyancy
-0.3
-0.2
0.1
auxotrophy
YNB Glucose
1.4
-0.8
-0.8
buoyancy on lipid accumulation
40 hrs Median Buoyancy
0.7
-0.4
0.0
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
0.7
-0.4
0.2
growth on ypd
YPD
-0.5
2.1
-1.0
ypd buoyancy
40 hrs Low Buoyancy
1.0
-0.4
0.2
ypd buoyancy
40 hrs Median Buoyancy
0.5
0.7
0.2
buoyancy on lipid accumulation
40 hrs High Buoyancy
0.4
0.8
0.5
ypd buoyancy
40 hrs No Buoyancy Separation
-0.3
1.0
1.2
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