Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_5734: 14102 - K01183 E3.2.1.14 chitinase, at 805175 to 807034 14102 mRNA_5735: 14103 - K12828 SF3B1, SAP155 splicing factor 3B subunit 1, at 807499 to 811509 14103 mRNA_5736: 14104 - K03250 EIF3E, INT6 translation initiation factor 3 subunit E, at 812074 to 813868 14104 mRNA_5737: 14105 - HMMPfam-Arsenite-resistance protein 2-PF04959,ProSitePatterns-Zinc finger C2H2 type domain signature.-PS00028,ProSiteProfiles-Zinc finger C2H2 type domain profile.-PS50157, at 814354 to 815055 14105 mRNA_5738: 14106 - SUPERFAMILY--SSF54928, at 815382 to 817330 14106
Group Condition mRNA_5734 mRNA_5735 mRNA_5736 mRNA_5737 mRNA_5738
14102
14103
14104
14105
14106
growth on ricinoleic acid YNB Ricinoleic Acid -0.6     -1.1 -1.7
growth on oleic acid YNB Oleic Acid -0.1     -1.7 -1.4
facs on lipid accumulation Sorted High BODIPY Gate 0.1     -2.1 -0.8
facs on lipid accumulation Sorted Low BODIPY Gate -0.8     -1.1 -0.2
growth on ricinoleic acid YNB Methylricinoleic Acid 1.0     -1.6 -1.5
facs on lipid accumulation Sorted No BODIPY Gate -0.5     -0.8 -0.6
growth on oleic acid YNB Glucose 0.1     -0.6 -0.9
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.7     -1.0 -1.0
auxotrophy Dropout Complete 1.2     -0.9 -1.4
growth on ricinoleic acid YNB Glucose 0.1     -0.4 -0.5
auxotrophy YNB Glucose 75mM Arginine 1.1     -0.8 -0.9
auxotrophy YNB Glucose 75mM Methionine 1.4     -0.7 -1.3
ypd buoyancy 40 hrs High Buoyancy -0.3     -0.2 0.1
auxotrophy YNB Glucose 1.4     -0.8 -0.8
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.7     -0.4 0.0
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.7     -0.4 0.2
growth on ypd YPD -0.5     2.1 -1.0
ypd buoyancy 40 hrs Low Buoyancy 1.0     -0.4 0.2
ypd buoyancy 40 hrs Median Buoyancy 0.5     0.7 0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.4     0.8 0.5
ypd buoyancy 40 hrs No Buoyancy Separation -0.3     1.0 1.2
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