Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_5732: 14100 - HMMPfam-bZIP transcription factor-PF00170,HMMPfam-Minimal binding motif of Hap4 for binding to Hap2/3/5-PF10297,ProSitePatterns-Basic-leucine zipper (bZIP) domain signature.-PS00036,SUPERFAMILY--SSF57959, at 798563 to 800717 14100 mRNA_5733: 14101 - KOG4197 FOG PPR repeat, at 800656 to 803521 14101 mRNA_5734: 14102 - K01183 E3.2.1.14 chitinase, at 805175 to 807034 14102 mRNA_5735: 14103 - K12828 SF3B1, SAP155 splicing factor 3B subunit 1, at 807499 to 811509 14103 mRNA_5736: 14104 - K03250 EIF3E, INT6 translation initiation factor 3 subunit E, at 812074 to 813868 14104
Group Condition mRNA_5732 mRNA_5733 mRNA_5734 mRNA_5735 mRNA_5736
14100
14101
14102
14103
14104
buoyancy on lipid accumulation 40 hrs Median Buoyancy -2.7 -0.1 0.7    
facs on lipid accumulation Sorted No BODIPY Gate -0.5 -0.5 -0.5    
growth on oleic acid YNB Oleic Acid -0.6 -0.1 -0.1    
buoyancy on lipid accumulation 40 hrs High Buoyancy -1.0 -0.0 0.4    
facs on lipid accumulation Sorted High BODIPY Gate -0.5 -0.2 0.1    
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -1.0 -0.3 0.7    
ypd buoyancy 40 hrs High Buoyancy 0.0 -0.2 -0.3    
growth on ricinoleic acid YNB Ricinoleic Acid -0.3 0.5 -0.6    
ypd buoyancy 40 hrs No Buoyancy Separation -0.3 0.3 -0.3    
growth on ricinoleic acid YNB Glucose -0.8 0.7 0.1    
growth on ricinoleic acid YNB Methylricinoleic Acid -1.4 0.3 1.0    
growth on oleic acid YNB Glucose -0.1 0.1 0.1    
facs on lipid accumulation Sorted Low BODIPY Gate 1.2 -0.3 -0.8    
ypd buoyancy 40 hrs Median Buoyancy -0.1 -0.2 0.5    
ypd buoyancy 40 hrs Low Buoyancy -0.3 -0.3 1.0    
growth on ypd YPD 0.9 -0.1 -0.5    
auxotrophy Dropout Complete -1.0 0.2 1.2    
auxotrophy YNB Glucose 75mM Arginine -0.7 0.1 1.1    
auxotrophy YNB Glucose -1.0 0.3 1.4    
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.1 -0.1 0.7    
auxotrophy YNB Glucose 75mM Methionine -0.4 0.2 1.4    
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