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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_5732: 14100 - HMMPfam-bZIP transcription factor-PF00170,HMMPfam-Minimal binding motif of Hap4 for binding to Hap2/3/5-PF10297,ProSitePatterns-Basic-leucine zipper (bZIP) domain signature.-PS00036,SUPERFAMILY--SSF57959, at 798563 to 800717
14100
mRNA_5733: 14101 - KOG4197 FOG PPR repeat, at 800656 to 803521
14101
mRNA_5734: 14102 - K01183 E3.2.1.14 chitinase, at 805175 to 807034
14102
mRNA_5735: 14103 - K12828 SF3B1, SAP155 splicing factor 3B subunit 1, at 807499 to 811509
14103
mRNA_5736: 14104 - K03250 EIF3E, INT6 translation initiation factor 3 subunit E, at 812074 to 813868
14104
Group
Condition
mRNA_5732
mRNA_5733
mRNA_5734
mRNA_5735
mRNA_5736
14100
14101
14102
14103
14104
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-2.7
-0.1
0.7
facs on lipid accumulation
Sorted No BODIPY Gate
-0.5
-0.5
-0.5
growth on oleic acid
YNB Oleic Acid
-0.6
-0.1
-0.1
buoyancy on lipid accumulation
40 hrs High Buoyancy
-1.0
-0.0
0.4
facs on lipid accumulation
Sorted High BODIPY Gate
-0.5
-0.2
0.1
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-1.0
-0.3
0.7
ypd buoyancy
40 hrs High Buoyancy
0.0
-0.2
-0.3
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.3
0.5
-0.6
ypd buoyancy
40 hrs No Buoyancy Separation
-0.3
0.3
-0.3
growth on ricinoleic acid
YNB Glucose
-0.8
0.7
0.1
growth on ricinoleic acid
YNB Methylricinoleic Acid
-1.4
0.3
1.0
growth on oleic acid
YNB Glucose
-0.1
0.1
0.1
facs on lipid accumulation
Sorted Low BODIPY Gate
1.2
-0.3
-0.8
ypd buoyancy
40 hrs Median Buoyancy
-0.1
-0.2
0.5
ypd buoyancy
40 hrs Low Buoyancy
-0.3
-0.3
1.0
growth on ypd
YPD
0.9
-0.1
-0.5
auxotrophy
Dropout Complete
-1.0
0.2
1.2
auxotrophy
YNB Glucose 75mM Arginine
-0.7
0.1
1.1
auxotrophy
YNB Glucose
-1.0
0.3
1.4
buoyancy on lipid accumulation
40 hrs Low Buoyancy
0.1
-0.1
0.7
auxotrophy
YNB Glucose 75mM Methionine
-0.4
0.2
1.4
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