Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_5722: 14090 - SUPERFAMILY--SSF52047, at 770253 to 773842 14090 mRNA_5723: 14091 - K15447 TRM44, METTL19 tRNASer (uridine44-2'-O)-methyltransferase, at 774192 to 776044 14091 mRNA_5724: 14092 - K05310 GPI7 ethanolaminephosphotransferase, at 776159 to 779515 14092 mRNA_5725: 14093 - K03234 EEF2 elongation factor 2, at 779611 to 783273 14093 mRNA_5726: 14094 - KOG2539 Mitochondrial/chloroplast ribosome small subunit component, at 783636 to 785944 14094
Group Condition mRNA_5722 mRNA_5723 mRNA_5724 mRNA_5725 mRNA_5726
14090
14091
14092
14093
14094
growth on ricinoleic acid YNB Methylricinoleic Acid 0.4 -0.0 -0.5 -1.4  
growth on ricinoleic acid YNB Ricinoleic Acid -0.1 0.2 -0.2 -1.1  
ypd buoyancy 40 hrs No Buoyancy Separation 0.0 0.5 0.2 -1.6  
facs on lipid accumulation Sorted High BODIPY Gate -0.1 -0.9 -0.0 0.1  
auxotrophy Dropout Complete -0.0 -0.2 -0.4 -0.3  
ypd buoyancy 40 hrs Median Buoyancy -0.4 -0.2 0.1 -0.3  
ypd buoyancy 40 hrs Low Buoyancy -0.4 0.0 0.0 -0.4  
growth on oleic acid YNB Glucose 0.4 -0.1 -0.2 -0.6  
growth on oleic acid YNB Oleic Acid 0.3 0.7 -0.0 -1.5  
growth on ricinoleic acid YNB Glucose 0.1 0.6 0.1 -1.0  
auxotrophy YNB Glucose 75mM Arginine 0.3 0.0 -0.2 -0.3  
ypd buoyancy 40 hrs High Buoyancy -0.1 -0.3 0.1 0.1  
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.1 -0.4 -0.4 0.9  
auxotrophy YNB Glucose 75mM Methionine 0.1 0.8 -0.2 -0.2  
facs on lipid accumulation Sorted No BODIPY Gate 0.3 0.4 -0.2 0.1  
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.1 0.8 0.0 0.3  
facs on lipid accumulation Sorted Low BODIPY Gate -0.3 -0.2 -0.2 1.7  
auxotrophy YNB Glucose 0.3 0.5 -0.3 0.5  
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.2 0.6 -0.2 1.2  
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.2 0.1 -0.1 1.5  
growth on ypd YPD 0.2 1.3 0.0 0.5  
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