Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_5720: 14088 - K04392 RAC1 Ras-related C3 botulinum toxin substrate 1, at 767473 to 768381 14088 mRNA_5721: 14089 - K19219 JMJD7 jumonji domain-containing protein 7, at 768732 to 770042 14089 mRNA_5722: 14090 - SUPERFAMILY--SSF52047, at 770253 to 773842 14090 mRNA_5723: 14091 - K15447 TRM44, METTL19 tRNASer (uridine44-2'-O)-methyltransferase, at 774192 to 776044 14091 mRNA_5724: 14092 - K05310 GPI7 ethanolaminephosphotransferase, at 776159 to 779515 14092
Group Condition mRNA_5720 mRNA_5721 mRNA_5722 mRNA_5723 mRNA_5724
14088
14089
14090
14091
14092
buoyancy on lipid accumulation 40 hrs Low Buoyancy -1.3 -0.1 -0.2 0.1 -0.1
facs on lipid accumulation Sorted Low BODIPY Gate -0.1 -0.1 -0.3 -0.2 -0.2
ypd buoyancy 40 hrs Median Buoyancy -0.4 0.1 -0.4 -0.2 0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.8 -0.2 0.1 -0.4 -0.4
facs on lipid accumulation Sorted High BODIPY Gate 0.8 0.1 -0.1 -0.9 -0.0
ypd buoyancy 40 hrs High Buoyancy -0.1 0.2 -0.1 -0.3 0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.1 -0.3 -0.2 0.6 -0.2
ypd buoyancy 40 hrs No Buoyancy Separation -1.0 0.5 0.0 0.5 0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.3 -0.3 -0.1 0.8 0.0
auxotrophy Dropout Complete 1.0 0.2 -0.0 -0.2 -0.4
facs on lipid accumulation Sorted No BODIPY Gate 0.3 0.0 0.3 0.4 -0.2
ypd buoyancy 40 hrs Low Buoyancy 1.2 0.1 -0.4 0.0 0.0
auxotrophy YNB Glucose 75mM Arginine 0.8 0.4 0.3 0.0 -0.2
growth on oleic acid YNB Glucose 1.1 0.3 0.4 -0.1 -0.2
growth on ypd YPD 0.4 -0.0 0.2 1.3 0.0
auxotrophy YNB Glucose 75mM Methionine 0.7 0.4 0.1 0.8 -0.2
auxotrophy YNB Glucose 1.2 0.5 0.3 0.5 -0.3
growth on ricinoleic acid YNB Glucose 1.5 0.4 0.1 0.6 0.1
growth on ricinoleic acid YNB Methylricinoleic Acid 2.8 0.5 0.4 -0.0 -0.5
growth on oleic acid YNB Oleic Acid 2.0 0.4 0.3 0.7 -0.0
growth on ricinoleic acid YNB Ricinoleic Acid 3.2 0.6 -0.1 0.2 -0.2
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