Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_5702: 14070 - K09478 ACADSB short/branched chain acyl-CoA dehydrogenase, at 721912 to 723848 14070 mRNA_5703: 14071 - KOG1289 Amino acid transporters, at 724681 to 726988 14071 mRNA_5704: 14072 - KOG2483 Upstream transcription factor 2/L-myc-2 protein, at 728026 to 730424 14072 mRNA_5705: 14073 - HMMPfam-Cysteine-rich secretory protein family-PF00188,SUPERFAMILY--SSF55797, at 731059 to 731970 14073 mRNA_5706: 14074 - Hypothetical Protein, at 731945 to 733165 14074
Group Condition mRNA_5702 mRNA_5703 mRNA_5704 mRNA_5705 mRNA_5706
14070
14071
14072
14073
14074
growth on ricinoleic acid YNB Methylricinoleic Acid -3.0 0.2 -1.3 0.1 0.4
growth on ricinoleic acid YNB Ricinoleic Acid -2.1 0.3 -1.5 0.0 0.4
growth on oleic acid YNB Oleic Acid -2.0 0.1 -0.4 -0.0 -0.3
facs on lipid accumulation Sorted High BODIPY Gate -0.4 0.2 -0.7 -0.9 0.1
auxotrophy Dropout Complete -0.7 0.1 -0.4 -0.7 0.1
ypd buoyancy 40 hrs Low Buoyancy -0.1 0.1 -1.0 0.1 -0.1
ypd buoyancy 40 hrs No Buoyancy Separation -0.0 0.4 0.2 -1.7 0.0
auxotrophy YNB Glucose 75mM Methionine -0.4 0.4 0.1 -0.5 -0.3
growth on ypd YPD -0.1 -0.0 -0.4 -0.4 0.3
growth on oleic acid YNB Glucose 0.0 0.1 -0.3 0.0 -0.4
auxotrophy YNB Glucose -0.1 0.4 -0.4 -0.3 -0.2
facs on lipid accumulation Sorted Low BODIPY Gate 0.1 -0.0 0.1 -0.9 0.2
facs on lipid accumulation Sorted No BODIPY Gate -0.1 0.3 -0.5 -0.6 0.6
auxotrophy YNB Glucose 75mM Arginine -0.1 0.3 -0.1 -0.1 -0.3
ypd buoyancy 40 hrs Median Buoyancy -0.3 0.1 -0.1 0.2 -0.0
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.1 -0.1 0.0 0.3 -0.4
growth on ricinoleic acid YNB Glucose -0.2 0.1 -0.4 0.1 0.5
ypd buoyancy 40 hrs High Buoyancy 0.3 0.0 -0.2 0.5 -0.3
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.7 -0.2 -0.2 0.5 0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.6 -0.4 -0.1 1.0 -0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.6 -0.2 0.8 0.8 0.4
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