Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_5700: 14068 - KOG0143 Iron/ascorbate family oxidoreductases, at 719283 to 720938 14068 mRNA_5701: 14069 - K13120 FAM32A protein FAM32A, at 721042 to 721632 14069 mRNA_5702: 14070 - K09478 ACADSB short/branched chain acyl-CoA dehydrogenase, at 721912 to 723848 14070 mRNA_5703: 14071 - KOG1289 Amino acid transporters, at 724681 to 726988 14071 mRNA_5704: 14072 - KOG2483 Upstream transcription factor 2/L-myc-2 protein, at 728026 to 730424 14072
Group Condition mRNA_5700 mRNA_5701 mRNA_5702 mRNA_5703 mRNA_5704
14068
14069
14070
14071
14072
growth on ricinoleic acid YNB Methylricinoleic Acid 0.2 -1.6 -3.0 0.2 -1.3
growth on ricinoleic acid YNB Ricinoleic Acid -0.1 -1.6 -2.1 0.3 -1.5
growth on oleic acid YNB Oleic Acid 0.1 0.0 -2.0 0.1 -0.4
auxotrophy Dropout Complete -0.1 -0.8 -0.7 0.1 -0.4
auxotrophy YNB Glucose -0.0 -1.7 -0.1 0.4 -0.4
growth on ricinoleic acid YNB Glucose 0.4 -1.6 -0.2 0.1 -0.4
facs on lipid accumulation Sorted High BODIPY Gate -0.1 -0.5 -0.4 0.2 -0.7
facs on lipid accumulation Sorted No BODIPY Gate 0.2 -1.2 -0.1 0.3 -0.5
facs on lipid accumulation Sorted Low BODIPY Gate 0.3 -1.3 0.1 -0.0 0.1
auxotrophy YNB Glucose 75mM Arginine -0.1 -0.6 -0.1 0.3 -0.1
ypd buoyancy 40 hrs Low Buoyancy -0.0 0.6 -0.1 0.1 -1.0
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.2 -0.3 0.6 -0.4 -0.1
growth on ypd YPD -0.0 0.2 -0.1 -0.0 -0.4
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.1 -0.2 0.1 -0.1 0.0
ypd buoyancy 40 hrs No Buoyancy Separation 0.3 -1.1 -0.0 0.4 0.2
ypd buoyancy 40 hrs Median Buoyancy 0.1 0.1 -0.3 0.1 -0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.1 -0.9 0.6 -0.2 0.8
auxotrophy YNB Glucose 75mM Methionine 0.2 -0.1 -0.4 0.4 0.1
growth on oleic acid YNB Glucose 0.1 0.5 0.0 0.1 -0.3
ypd buoyancy 40 hrs High Buoyancy 0.1 0.2 0.3 0.0 -0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.1 0.9 0.7 -0.2 -0.2
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