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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_5698: 14066 - BLAST transmembrane protein, putative [Rhizoctonia solani A..., at 714233 to 715636
14066
mRNA_5699: 14067 - HMMPfam-Vault protein inter-alpha-trypsin domain-PF08487,HMMPfam-von Willebrand factor type A domain-PF13768,ProSiteProfiles-VWFA domain profile.-PS50234,ProSiteProfiles-VIT domain profile.-PS51468,SMART-von Willebrand factor (vWF) type A domain-SM00327,SMART-Vault protein Inter-alpha-Trypsin domain-SM00609,SUPERFAMILY--SSF53300, at 716086 to 718925
14067
mRNA_5700: 14068 - KOG0143 Iron/ascorbate family oxidoreductases, at 719283 to 720938
14068
mRNA_5701: 14069 - K13120 FAM32A protein FAM32A, at 721042 to 721632
14069
mRNA_5702: 14070 - K09478 ACADSB short/branched chain acyl-CoA dehydrogenase, at 721912 to 723848
14070
Group
Condition
mRNA_5698
mRNA_5699
mRNA_5700
mRNA_5701
mRNA_5702
14066
14067
14068
14069
14070
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.3
-0.1
0.2
-1.6
-3.0
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.1
0.0
-0.1
-1.6
-2.1
growth on oleic acid
YNB Oleic Acid
-0.3
-0.0
0.1
0.0
-2.0
growth on ricinoleic acid
YNB Glucose
-0.3
-0.0
0.4
-1.6
-0.2
auxotrophy
YNB Glucose
-0.3
0.4
-0.0
-1.7
-0.1
auxotrophy
Dropout Complete
-0.2
0.3
-0.1
-0.8
-0.7
auxotrophy
YNB Glucose 75mM Arginine
-0.6
0.3
-0.1
-0.6
-0.1
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.2
-0.1
0.3
-1.3
0.1
facs on lipid accumulation
Sorted High BODIPY Gate
-0.1
0.2
-0.1
-0.5
-0.4
facs on lipid accumulation
Sorted No BODIPY Gate
0.5
0.1
0.2
-1.2
-0.1
auxotrophy
YNB Glucose 75mM Methionine
-0.4
0.3
0.2
-0.1
-0.4
ypd buoyancy
40 hrs No Buoyancy Separation
0.3
0.1
0.3
-1.1
-0.0
buoyancy on lipid accumulation
40 hrs Low Buoyancy
0.1
0.1
-0.1
-0.9
0.6
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
0.1
-0.2
0.1
-0.2
0.1
ypd buoyancy
40 hrs Median Buoyancy
-0.1
0.1
0.1
0.1
-0.3
buoyancy on lipid accumulation
40 hrs High Buoyancy
0.1
-0.0
-0.2
-0.3
0.6
growth on ypd
YPD
-0.2
0.3
-0.0
0.2
-0.1
ypd buoyancy
40 hrs Low Buoyancy
-0.2
-0.0
-0.0
0.6
-0.1
growth on oleic acid
YNB Glucose
-0.2
0.2
0.1
0.5
0.0
ypd buoyancy
40 hrs High Buoyancy
-0.2
0.4
0.1
0.2
0.3
buoyancy on lipid accumulation
40 hrs Median Buoyancy
0.0
-0.2
-0.1
0.9
0.7
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