Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_5697: 14065 - K14568 EMG1, NEP1 rRNA small subunit pseudouridine methyltransferase Nep1, at 712124 to 713421 14065 mRNA_5698: 14066 - BLAST transmembrane protein, putative [Rhizoctonia solani A..., at 714233 to 715636 14066 mRNA_5699: 14067 - HMMPfam-Vault protein inter-alpha-trypsin domain-PF08487,HMMPfam-von Willebrand factor type A domain-PF13768,ProSiteProfiles-VWFA domain profile.-PS50234,ProSiteProfiles-VIT domain profile.-PS51468,SMART-von Willebrand factor (vWF) type A domain-SM00327,SMART-Vault protein Inter-alpha-Trypsin domain-SM00609,SUPERFAMILY--SSF53300, at 716086 to 718925 14067 mRNA_5700: 14068 - KOG0143 Iron/ascorbate family oxidoreductases, at 719283 to 720938 14068 mRNA_5701: 14069 - K13120 FAM32A protein FAM32A, at 721042 to 721632 14069
Group Condition mRNA_5697 mRNA_5698 mRNA_5699 mRNA_5700 mRNA_5701
14065
14066
14067
14068
14069
growth on ricinoleic acid YNB Ricinoleic Acid   -0.1 0.0 -0.1 -1.6
growth on ricinoleic acid YNB Methylricinoleic Acid   -0.3 -0.1 0.2 -1.6
growth on ricinoleic acid YNB Glucose   -0.3 -0.0 0.4 -1.6
auxotrophy YNB Glucose   -0.3 0.4 -0.0 -1.7
facs on lipid accumulation Sorted Low BODIPY Gate   -0.2 -0.1 0.3 -1.3
auxotrophy YNB Glucose 75mM Arginine   -0.6 0.3 -0.1 -0.6
buoyancy on lipid accumulation 40 hrs Low Buoyancy   0.1 0.1 -0.1 -0.9
auxotrophy Dropout Complete   -0.2 0.3 -0.1 -0.8
buoyancy on lipid accumulation 40 hrs High Buoyancy   0.1 -0.0 -0.2 -0.3
facs on lipid accumulation Sorted High BODIPY Gate   -0.1 0.2 -0.1 -0.5
ypd buoyancy 40 hrs No Buoyancy Separation   0.3 0.1 0.3 -1.1
facs on lipid accumulation Sorted No BODIPY Gate   0.5 0.1 0.2 -1.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation   0.1 -0.2 0.1 -0.2
growth on oleic acid YNB Oleic Acid   -0.3 -0.0 0.1 0.0
auxotrophy YNB Glucose 75mM Methionine   -0.4 0.3 0.2 -0.1
ypd buoyancy 40 hrs Median Buoyancy   -0.1 0.1 0.1 0.1
growth on ypd YPD   -0.2 0.3 -0.0 0.2
ypd buoyancy 40 hrs Low Buoyancy   -0.2 -0.0 -0.0 0.6
ypd buoyancy 40 hrs High Buoyancy   -0.2 0.4 0.1 0.2
growth on oleic acid YNB Glucose   -0.2 0.2 0.1 0.5
buoyancy on lipid accumulation 40 hrs Median Buoyancy   0.0 -0.2 -0.1 0.9
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