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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_5692: 14060 - K07342 SEC61G, SSS1, secE protein transport protein SEC61 subunit gamma and related proteins, at 703931 to 704550
14060
mRNA_5693: 14061 - KOG4186 Peroxisomal biogenesis protein (peroxin), at 704894 to 706050
14061
mRNA_5694: 14062 - HMMPfam-Pyridoxamine 5'-phosphate oxidase-PF13883,SUPERFAMILY--SSF50475, at 706295 to 707436
14062
mRNA_5695: 14063 - K08869 ADCK, ABC1 aarF domain-containing kinase, at 708061 to 710208
14063
mRNA_5696: 14064 - K07152 SCO1_2 protein SCO1/2, at 710565 to 711827
14064
Group
Condition
mRNA_5692
mRNA_5693
mRNA_5694
mRNA_5695
mRNA_5696
14060
14061
14062
14063
14064
growth on ricinoleic acid
YNB Ricinoleic Acid
-3.9
0.2
-1.7
growth on oleic acid
YNB Oleic Acid
-3.7
-0.1
-1.0
growth on ricinoleic acid
YNB Methylricinoleic Acid
-2.7
0.0
-1.6
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.5
-0.0
-1.5
ypd buoyancy
40 hrs No Buoyancy Separation
-0.3
0.1
-1.1
growth on ypd
YPD
-1.3
0.0
0.1
ypd buoyancy
40 hrs High Buoyancy
-0.4
0.4
-1.1
auxotrophy
YNB Glucose
-0.2
0.2
-1.0
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.3
-0.3
-0.5
growth on oleic acid
YNB Glucose
-0.3
-0.2
-0.6
facs on lipid accumulation
Sorted High BODIPY Gate
-1.2
0.3
-0.0
auxotrophy
YNB Glucose 75mM Arginine
-0.2
0.2
-0.7
auxotrophy
YNB Glucose 75mM Methionine
-0.6
0.1
-0.1
ypd buoyancy
40 hrs Low Buoyancy
0.1
0.1
-0.6
growth on ricinoleic acid
YNB Glucose
0.1
0.4
-0.8
ypd buoyancy
40 hrs Median Buoyancy
-0.3
0.3
0.0
facs on lipid accumulation
Sorted No BODIPY Gate
-0.2
0.2
0.0
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.3
-0.2
0.4
auxotrophy
Dropout Complete
-0.0
0.2
-0.2
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
0.2
-0.2
-0.0
buoyancy on lipid accumulation
40 hrs Low Buoyancy
0.3
-0.1
-0.1
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