Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_5689: 14057 - KOG4206 Spliceosomal protein snRNP-U1A/U2B, at 698626 to 699781 14057 mRNA_5690: 14058 - K17710 PTCD1 pentatricopeptide repeat domain-containing protein 1, at 700061 to 702418 14058 mRNA_5691: 14059 - K05956 RABGGTB geranylgeranyl transferase type-2 subunit beta, at 702486 to 703817 14059 mRNA_5692: 14060 - K07342 SEC61G, SSS1, secE protein transport protein SEC61 subunit gamma and related proteins, at 703931 to 704550 14060 mRNA_5693: 14061 - KOG4186 Peroxisomal biogenesis protein (peroxin), at 704894 to 706050 14061
Group Condition mRNA_5689 mRNA_5690 mRNA_5691 mRNA_5692 mRNA_5693
14057
14058
14059
14060
14061
growth on ricinoleic acid YNB Ricinoleic Acid -0.5       -3.9
growth on oleic acid YNB Oleic Acid 0.1       -3.7
growth on ricinoleic acid YNB Methylricinoleic Acid 0.1       -2.7
facs on lipid accumulation Sorted Low BODIPY Gate -1.9       -0.5
facs on lipid accumulation Sorted High BODIPY Gate -0.6       -1.2
growth on ypd YPD -0.2       -1.3
facs on lipid accumulation Sorted No BODIPY Gate -1.3       -0.2
auxotrophy YNB Glucose 75mM Arginine -0.6       -0.2
ypd buoyancy 40 hrs High Buoyancy -0.3       -0.4
ypd buoyancy 40 hrs Median Buoyancy -0.4       -0.3
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.6       0.2
auxotrophy YNB Glucose 75mM Methionine 0.3       -0.6
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.1       -0.3
auxotrophy YNB Glucose -0.1       -0.2
ypd buoyancy 40 hrs Low Buoyancy -0.0       0.1
ypd buoyancy 40 hrs No Buoyancy Separation 0.6       -0.3
growth on oleic acid YNB Glucose 0.6       -0.3
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.9       -0.3
auxotrophy Dropout Complete 0.7       -0.0
growth on ricinoleic acid YNB Glucose 0.7       0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.5       0.3
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