Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_5688: 14056 - K12199 VTA1, LIP5 vacuolar protein sorting-associated protein VTA1, at 697061 to 698504 14056 mRNA_5689: 14057 - KOG4206 Spliceosomal protein snRNP-U1A/U2B, at 698626 to 699781 14057 mRNA_5690: 14058 - K17710 PTCD1 pentatricopeptide repeat domain-containing protein 1, at 700061 to 702418 14058 mRNA_5691: 14059 - K05956 RABGGTB geranylgeranyl transferase type-2 subunit beta, at 702486 to 703817 14059 mRNA_5692: 14060 - K07342 SEC61G, SSS1, secE protein transport protein SEC61 subunit gamma and related proteins, at 703931 to 704550 14060
Group Condition mRNA_5688 mRNA_5689 mRNA_5690 mRNA_5691 mRNA_5692
14056
14057
14058
14059
14060
facs on lipid accumulation Sorted Low BODIPY Gate -3.9 -1.9      
facs on lipid accumulation Sorted No BODIPY Gate -2.1 -1.3      
facs on lipid accumulation Sorted High BODIPY Gate -1.0 -0.6      
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.9 -0.6      
auxotrophy YNB Glucose 75mM Arginine -0.7 -0.6      
ypd buoyancy 40 hrs High Buoyancy -0.0 -0.3      
ypd buoyancy 40 hrs Median Buoyancy 0.2 -0.4      
growth on oleic acid YNB Oleic Acid -0.2 0.1      
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.0 -0.1      
growth on ricinoleic acid YNB Ricinoleic Acid 0.5 -0.5      
auxotrophy YNB Glucose 75mM Methionine -0.3 0.3      
growth on ricinoleic acid YNB Methylricinoleic Acid 0.1 0.1      
auxotrophy Dropout Complete -0.3 0.7      
growth on oleic acid YNB Glucose -0.2 0.6      
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.4 0.9      
growth on ypd YPD 0.7 -0.2      
auxotrophy YNB Glucose 0.6 -0.1      
ypd buoyancy 40 hrs Low Buoyancy 0.6 -0.0      
ypd buoyancy 40 hrs No Buoyancy Separation 1.1 0.6      
buoyancy on lipid accumulation 40 hrs Low Buoyancy 1.2 0.5      
growth on ricinoleic acid YNB Glucose 1.5 0.7      
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