Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_5687: 14055 - K08764 SCP2, SCPX sterol carrier protein 2, at 694932 to 696791 14055 mRNA_5688: 14056 - K12199 VTA1, LIP5 vacuolar protein sorting-associated protein VTA1, at 697061 to 698504 14056 mRNA_5689: 14057 - KOG4206 Spliceosomal protein snRNP-U1A/U2B, at 698626 to 699781 14057 mRNA_5690: 14058 - K17710 PTCD1 pentatricopeptide repeat domain-containing protein 1, at 700061 to 702418 14058 mRNA_5691: 14059 - K05956 RABGGTB geranylgeranyl transferase type-2 subunit beta, at 702486 to 703817 14059
Group Condition mRNA_5687 mRNA_5688 mRNA_5689 mRNA_5690 mRNA_5691
14055
14056
14057
14058
14059
facs on lipid accumulation Sorted Low BODIPY Gate -1.1 -3.9 -1.9    
facs on lipid accumulation Sorted No BODIPY Gate -0.3 -2.1 -1.3    
facs on lipid accumulation Sorted High BODIPY Gate -0.5 -1.0 -0.6    
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.0 -0.9 -0.6    
auxotrophy YNB Glucose 75mM Arginine -0.1 -0.7 -0.6    
ypd buoyancy 40 hrs High Buoyancy -0.2 -0.0 -0.3    
growth on ricinoleic acid YNB Ricinoleic Acid -0.6 0.5 -0.5    
growth on oleic acid YNB Oleic Acid -0.3 -0.2 0.1    
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.4 0.0 -0.1    
ypd buoyancy 40 hrs Median Buoyancy 0.0 0.2 -0.4    
growth on ricinoleic acid YNB Methylricinoleic Acid -0.4 0.1 0.1    
auxotrophy YNB Glucose 75mM Methionine 0.1 -0.3 0.3    
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.4 -0.4 0.9    
auxotrophy Dropout Complete -0.3 -0.3 0.7    
growth on ypd YPD -0.2 0.7 -0.2    
ypd buoyancy 40 hrs Low Buoyancy -0.1 0.6 -0.0    
growth on oleic acid YNB Glucose -0.0 -0.2 0.6    
auxotrophy YNB Glucose 0.3 0.6 -0.1    
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.0 1.2 0.5    
ypd buoyancy 40 hrs No Buoyancy Separation 0.1 1.1 0.6    
growth on ricinoleic acid YNB Glucose 0.2 1.5 0.7    
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