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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_5678: 14046 - K06005 SAP candidapepsin, at 673852 to 675422
14046
mRNA_5679: 14047 - KOG1944 Peroxisomal membrane protein MPV17 and related proteins, at 675766 to 676852
14047
mRNA_5680: 14048 - Hypothetical Protein, at 677076 to 678500
14048
mRNA_5681: 14049 - KOG3146 Dolichyl pyrophosphate phosphatase and related acid phosphatases, at 678891 to 679763
14049
mRNA_5682: 14050 - K03349 APC2 anaphase-promoting complex subunit 2, at 679851 to 681974
14050
Group
Condition
mRNA_5678
mRNA_5679
mRNA_5680
mRNA_5681
mRNA_5682
14046
14047
14048
14049
14050
facs on lipid accumulation
Sorted Low BODIPY Gate
0.1
0.3
0.1
-4.7
auxotrophy
YNB Glucose 75mM Methionine
-0.5
0.7
-0.2
-2.2
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.1
-0.1
0.1
-2.0
buoyancy on lipid accumulation
40 hrs High Buoyancy
0.3
0.1
-0.1
-2.1
ypd buoyancy
40 hrs Low Buoyancy
-0.0
0.4
-0.1
-1.9
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
0.0
0.3
0.1
-2.0
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.2
-0.0
0.0
-1.3
facs on lipid accumulation
Sorted High BODIPY Gate
-0.2
0.2
0.1
-1.5
buoyancy on lipid accumulation
40 hrs Low Buoyancy
0.4
0.2
-0.1
-1.7
auxotrophy
YNB Glucose 75mM Arginine
-0.3
0.4
-0.3
-1.0
facs on lipid accumulation
Sorted No BODIPY Gate
0.1
0.0
0.3
-1.2
ypd buoyancy
40 hrs No Buoyancy Separation
0.3
0.7
0.0
-1.4
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.2
-0.3
0.4
-0.4
ypd buoyancy
40 hrs High Buoyancy
-0.3
0.5
0.1
-0.4
ypd buoyancy
40 hrs Median Buoyancy
-0.0
0.5
0.1
-0.7
auxotrophy
YNB Glucose
-0.3
0.6
-0.1
-0.4
auxotrophy
Dropout Complete
-0.3
0.7
-0.1
-0.2
growth on ricinoleic acid
YNB Glucose
-0.0
-0.1
-0.1
0.2
growth on oleic acid
YNB Glucose
0.2
0.4
-0.4
-0.1
growth on ypd
YPD
0.3
0.5
0.3
-0.8
growth on oleic acid
YNB Oleic Acid
0.3
0.2
0.1
-0.2
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