Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_5667: 14035 - K11233 SSK1 osomolarity two-component system, response regulator SSK1, at 642793 to 648199 14035 mRNA_5668: 14036 - K01227 E3.2.1.96 mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase, at 648393 to 650754 14036 mRNA_5669: 14037 - K01736 aroC chorismate synthase, at 651115 to 652658 14037 mRNA_5670: 14038 - K18995 DHX29 ATP-dependent RNA helicase DHX29, at 653055 to 658546 14038 mRNA_5671: 14039 - K11675 IES1 Ino eighty subunit 1, at 659400 to 661417 14039
Group Condition mRNA_5667 mRNA_5668 mRNA_5669 mRNA_5670 mRNA_5671
14035
14036
14037
14038
14039
auxotrophy Dropout Complete -1.3 -0.1   0.1 -0.7
facs on lipid accumulation Sorted Low BODIPY Gate -0.6 -0.6   0.1 -0.6
facs on lipid accumulation Sorted High BODIPY Gate -0.5 -0.4   -0.5 -0.2
auxotrophy YNB Glucose -0.7 -0.2   -0.0 -0.6
auxotrophy YNB Glucose 75mM Methionine -0.6 -0.0   -0.1 -0.4
auxotrophy YNB Glucose 75mM Arginine -0.6 -0.1   0.1 -0.3
growth on ricinoleic acid YNB Ricinoleic Acid -0.4 -0.4   0.1 -0.2
growth on ricinoleic acid YNB Glucose -0.3 -0.4   -0.1 -0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.5 -0.2   -0.2 0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.3 -0.3   -0.1 -0.1
growth on ricinoleic acid YNB Methylricinoleic Acid -0.1 -0.3   -0.2 0.1
facs on lipid accumulation Sorted No BODIPY Gate -0.1 -0.1   -0.4 0.0
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.1 -0.2   -0.1 -0.1
growth on oleic acid YNB Oleic Acid -0.3 0.1   0.1 0.0
growth on ypd YPD 0.2 -0.0   -0.1 0.0
ypd buoyancy 40 hrs Median Buoyancy -0.0 -0.0   0.1 0.1
growth on oleic acid YNB Glucose -0.2 0.2   0.0 0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.0 -0.5   0.1 1.0
ypd buoyancy 40 hrs High Buoyancy 0.5 -0.0   0.1 0.5
ypd buoyancy 40 hrs Low Buoyancy 0.3 0.0   0.3 0.6
ypd buoyancy 40 hrs No Buoyancy Separation 1.2 0.1   -0.0 0.9
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