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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_5665: 14033 - K15083 RAD16 DNA repair protein RAD16, at 634205 to 636873
14033
mRNA_5666: 14034 - Hypothetical Protein, at 637260 to 638584
14034
mRNA_5667: 14035 - K11233 SSK1 osomolarity two-component system, response regulator SSK1, at 642793 to 648199
14035
mRNA_5668: 14036 - K01227 E3.2.1.96 mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase, at 648393 to 650754
14036
mRNA_5669: 14037 - K01736 aroC chorismate synthase, at 651115 to 652658
14037
Group
Condition
mRNA_5665
mRNA_5666
mRNA_5667
mRNA_5668
mRNA_5669
14033
14034
14035
14036
14037
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.1
-0.2
-0.6
-0.6
auxotrophy
Dropout Complete
0.0
-0.1
-1.3
-0.1
auxotrophy
YNB Glucose 75mM Arginine
-0.2
0.0
-0.6
-0.1
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.2
0.2
-0.4
-0.4
growth on ricinoleic acid
YNB Glucose
-0.1
-0.0
-0.3
-0.4
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.1
-0.2
-0.1
-0.3
auxotrophy
YNB Glucose
-0.2
0.3
-0.7
-0.2
facs on lipid accumulation
Sorted High BODIPY Gate
0.1
0.1
-0.5
-0.4
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.2
0.2
-0.3
-0.3
buoyancy on lipid accumulation
40 hrs Median Buoyancy
0.1
0.1
-0.5
-0.2
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.1
0.1
-0.0
-0.5
auxotrophy
YNB Glucose 75mM Methionine
0.0
0.1
-0.6
-0.0
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.0
-0.1
-0.1
-0.2
facs on lipid accumulation
Sorted No BODIPY Gate
0.1
-0.2
-0.1
-0.1
growth on oleic acid
YNB Oleic Acid
-0.2
0.1
-0.3
0.1
ypd buoyancy
40 hrs Median Buoyancy
0.2
-0.2
-0.0
-0.0
growth on ypd
YPD
-0.3
0.2
0.2
-0.0
ypd buoyancy
40 hrs Low Buoyancy
0.0
-0.1
0.3
0.0
ypd buoyancy
40 hrs High Buoyancy
0.1
-0.3
0.5
-0.0
growth on oleic acid
YNB Glucose
-0.1
0.4
-0.2
0.2
ypd buoyancy
40 hrs No Buoyancy Separation
-0.5
-0.4
1.2
0.1
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