Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_5651: 14019 - K13728 MAD2L2 mitotic spindle assembly checkpoint protein MAD2B, at 598691 to 599963 14019 mRNA_5652: 14020 - KOG4443 Putative transcription factor HALR/MLL3, involved in embryonic development, at 602133 to 602528 14020 mRNA_5653: 14021 - Hypothetical Protein, at 603450 to 604586 14021 mRNA_5654: 14022 - K01637 E4.1.3.1, aceA isocitrate lyase, at 605186 to 607588 14022 mRNA_5655: 14023 - K01115 PLD1_2 phospholipase D1/2, at 607805 to 615263 14023
Group Condition mRNA_5651 mRNA_5652 mRNA_5653 mRNA_5654 mRNA_5655
14019
14020
14021
14022
14023
growth on oleic acid YNB Oleic Acid 0.1 -1.0 -0.0 -3.5 -0.4
growth on ricinoleic acid YNB Ricinoleic Acid 0.3 1.7 -0.9 -4.3 -0.7
growth on ricinoleic acid YNB Methylricinoleic Acid 1.2 1.1 -0.5 -4.6 -0.4
auxotrophy YNB Glucose 75mM Methionine 0.0 -1.0 -0.7 0.0 -0.5
auxotrophy YNB Glucose 0.1 -0.8 -0.5 -0.1 -0.4
facs on lipid accumulation Sorted Low BODIPY Gate -0.1 -1.0 0.1 0.1 -0.9
auxotrophy Dropout Complete 0.0 -0.5 -0.4 -0.2 -0.4
auxotrophy YNB Glucose 75mM Arginine -0.0 -0.9 -0.1 0.1 -0.3
ypd buoyancy 40 hrs No Buoyancy Separation -0.2 -0.7 0.5 -0.1 0.2
growth on oleic acid YNB Glucose 0.3 -0.1 0.0 -0.1 -0.3
ypd buoyancy 40 hrs Low Buoyancy 0.3 -0.5 0.4 0.1 0.1
ypd buoyancy 40 hrs High Buoyancy 0.1 -0.5 0.3 0.0 0.4
facs on lipid accumulation Sorted No BODIPY Gate -0.1 0.7 0.1 -0.1 -0.2
ypd buoyancy 40 hrs Median Buoyancy 0.3 -0.2 0.4 0.1 -0.0
facs on lipid accumulation Sorted High BODIPY Gate -0.6 0.6 0.6 0.1 0.1
growth on ypd YPD 0.7 0.3 -0.2 0.0 0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.1 0.9 0.5 -0.5 0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.0 1.5 0.2 -0.3 -0.1
growth on ricinoleic acid YNB Glucose 1.6 1.2 -0.5 -0.3 -0.4
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.2 2.7 0.5 -0.5 0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.0 3.2 1.4 0.1 0.2
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