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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_5645: 14013 - BLAST putative alkaline phosphatase [Phaeomoniella chlamydo..., at 584713 to 586254
14013
mRNA_5646: 14014 - K00826 E2.6.1.42, ilvE branched-chain amino acid aminotransferase, at 586465 to 587964
14014
mRNA_5647: 14015 - KOG4719 Nuclear pore complex protein, at 588479 to 592654
14015
mRNA_5648: 14016 - K11268 ESCO, ECO1 N-acetyltransferase, at 592841 to 594405
14016
mRNA_5649: 14017 - SUPERFAMILY--SSF52047, at 595094 to 596616
14017
Group
Condition
mRNA_5645
mRNA_5646
mRNA_5647
mRNA_5648
mRNA_5649
14013
14014
14015
14016
14017
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.1
-0.9
-0.2
-0.2
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.0
-0.7
-0.2
-0.4
growth on ricinoleic acid
YNB Glucose
-0.0
-0.6
-0.2
-0.2
growth on ypd
YPD
-0.1
-0.3
-0.1
-0.4
auxotrophy
Dropout Complete
-0.4
-0.3
-0.3
0.3
auxotrophy
YNB Glucose
-0.3
-0.2
-0.1
0.1
ypd buoyancy
40 hrs Low Buoyancy
-0.2
0.1
-0.3
-0.1
growth on oleic acid
YNB Glucose
-0.2
-0.3
-0.1
0.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.2
-0.1
0.0
-0.1
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.2
0.1
0.1
-0.3
ypd buoyancy
40 hrs No Buoyancy Separation
-0.0
0.1
-0.1
-0.3
growth on oleic acid
YNB Oleic Acid
-0.2
-0.3
0.2
0.1
ypd buoyancy
40 hrs Median Buoyancy
-0.0
0.0
-0.0
-0.3
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.2
0.2
-0.0
-0.2
ypd buoyancy
40 hrs High Buoyancy
-0.1
0.2
-0.3
-0.1
auxotrophy
YNB Glucose 75mM Methionine
-0.3
0.1
-0.3
0.2
auxotrophy
YNB Glucose 75mM Arginine
-0.2
-0.1
-0.2
0.5
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
0.2
0.1
-0.1
-0.1
facs on lipid accumulation
Sorted High BODIPY Gate
-0.1
-0.0
0.5
-0.3
buoyancy on lipid accumulation
40 hrs Median Buoyancy
0.0
0.0
0.0
0.0
facs on lipid accumulation
Sorted No BODIPY Gate
0.1
0.1
0.8
0.1
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