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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_5643: 14011 - BLAST Ras-related protein Rab-44 [Buceros rhinoceros silves..., at 579913 to 580872
14011
mRNA_5644: 14012 - Hypothetical Protein, at 583736 to 584443
14012
mRNA_5645: 14013 - BLAST putative alkaline phosphatase [Phaeomoniella chlamydo..., at 584713 to 586254
14013
mRNA_5646: 14014 - K00826 E2.6.1.42, ilvE branched-chain amino acid aminotransferase, at 586465 to 587964
14014
mRNA_5647: 14015 - KOG4719 Nuclear pore complex protein, at 588479 to 592654
14015
Group
Condition
mRNA_5643
mRNA_5644
mRNA_5645
mRNA_5646
mRNA_5647
14011
14012
14013
14014
14015
growth on ricinoleic acid
YNB Ricinoleic Acid
0.5
-0.7
-0.1
-0.9
-0.2
growth on ricinoleic acid
YNB Methylricinoleic Acid
0.4
-0.8
-0.0
-0.7
-0.2
growth on oleic acid
YNB Oleic Acid
-0.1
-0.8
-0.2
-0.3
0.2
growth on ypd
YPD
0.0
-0.6
-0.1
-0.3
-0.1
ypd buoyancy
40 hrs Low Buoyancy
0.3
-0.7
-0.2
0.1
-0.3
auxotrophy
YNB Glucose
0.1
-0.2
-0.3
-0.2
-0.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
0.3
-0.8
-0.2
-0.1
0.0
auxotrophy
Dropout Complete
0.0
0.1
-0.4
-0.3
-0.3
auxotrophy
YNB Glucose 75mM Arginine
0.2
-0.3
-0.2
-0.1
-0.2
growth on ricinoleic acid
YNB Glucose
0.3
-0.1
-0.0
-0.6
-0.2
growth on oleic acid
YNB Glucose
0.2
-0.1
-0.2
-0.3
-0.1
auxotrophy
YNB Glucose 75mM Methionine
0.4
-0.2
-0.3
0.1
-0.3
buoyancy on lipid accumulation
40 hrs Median Buoyancy
0.3
-0.3
0.0
0.0
0.0
facs on lipid accumulation
Sorted High BODIPY Gate
-0.4
0.2
-0.1
-0.0
0.5
ypd buoyancy
40 hrs High Buoyancy
0.2
0.1
-0.1
0.2
-0.3
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
0.3
-0.1
0.2
0.1
-0.1
ypd buoyancy
40 hrs Median Buoyancy
0.5
0.4
-0.0
0.0
-0.0
buoyancy on lipid accumulation
40 hrs High Buoyancy
0.9
0.1
-0.2
0.2
-0.0
facs on lipid accumulation
Sorted Low BODIPY Gate
0.1
0.9
-0.2
0.1
0.1
ypd buoyancy
40 hrs No Buoyancy Separation
0.1
1.0
-0.0
0.1
-0.1
facs on lipid accumulation
Sorted No BODIPY Gate
0.2
-0.0
0.1
0.1
0.8
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