Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_5643: 14011 - BLAST Ras-related protein Rab-44 [Buceros rhinoceros silves..., at 579913 to 580872 14011 mRNA_5644: 14012 - Hypothetical Protein, at 583736 to 584443 14012 mRNA_5645: 14013 - BLAST putative alkaline phosphatase [Phaeomoniella chlamydo..., at 584713 to 586254 14013 mRNA_5646: 14014 - K00826 E2.6.1.42, ilvE branched-chain amino acid aminotransferase, at 586465 to 587964 14014 mRNA_5647: 14015 - KOG4719 Nuclear pore complex protein, at 588479 to 592654 14015
Group Condition mRNA_5643 mRNA_5644 mRNA_5645 mRNA_5646 mRNA_5647
14011
14012
14013
14014
14015
growth on ricinoleic acid YNB Ricinoleic Acid 0.5 -0.7 -0.1 -0.9 -0.2
growth on ricinoleic acid YNB Methylricinoleic Acid 0.4 -0.8 -0.0 -0.7 -0.2
growth on oleic acid YNB Oleic Acid -0.1 -0.8 -0.2 -0.3 0.2
growth on ypd YPD 0.0 -0.6 -0.1 -0.3 -0.1
ypd buoyancy 40 hrs Low Buoyancy 0.3 -0.7 -0.2 0.1 -0.3
auxotrophy YNB Glucose 0.1 -0.2 -0.3 -0.2 -0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.3 -0.8 -0.2 -0.1 0.0
auxotrophy Dropout Complete 0.0 0.1 -0.4 -0.3 -0.3
auxotrophy YNB Glucose 75mM Arginine 0.2 -0.3 -0.2 -0.1 -0.2
growth on ricinoleic acid YNB Glucose 0.3 -0.1 -0.0 -0.6 -0.2
growth on oleic acid YNB Glucose 0.2 -0.1 -0.2 -0.3 -0.1
auxotrophy YNB Glucose 75mM Methionine 0.4 -0.2 -0.3 0.1 -0.3
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.3 -0.3 0.0 0.0 0.0
facs on lipid accumulation Sorted High BODIPY Gate -0.4 0.2 -0.1 -0.0 0.5
ypd buoyancy 40 hrs High Buoyancy 0.2 0.1 -0.1 0.2 -0.3
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.3 -0.1 0.2 0.1 -0.1
ypd buoyancy 40 hrs Median Buoyancy 0.5 0.4 -0.0 0.0 -0.0
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.9 0.1 -0.2 0.2 -0.0
facs on lipid accumulation Sorted Low BODIPY Gate 0.1 0.9 -0.2 0.1 0.1
ypd buoyancy 40 hrs No Buoyancy Separation 0.1 1.0 -0.0 0.1 -0.1
facs on lipid accumulation Sorted No BODIPY Gate 0.2 -0.0 0.1 0.1 0.8
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