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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_5642: 14010 - Interpro Mitochondrial inner-membrane-bound regulator, at 577530 to 579606
14010
mRNA_5643: 14011 - BLAST Ras-related protein Rab-44 [Buceros rhinoceros silves..., at 579913 to 580872
14011
mRNA_5644: 14012 - Hypothetical Protein, at 583736 to 584443
14012
mRNA_5645: 14013 - BLAST putative alkaline phosphatase [Phaeomoniella chlamydo..., at 584713 to 586254
14013
mRNA_5646: 14014 - K00826 E2.6.1.42, ilvE branched-chain amino acid aminotransferase, at 586465 to 587964
14014
Group
Condition
mRNA_5642
mRNA_5643
mRNA_5644
mRNA_5645
mRNA_5646
14010
14011
14012
14013
14014
auxotrophy
YNB Glucose
-0.7
0.1
-0.2
-0.3
-0.2
ypd buoyancy
40 hrs High Buoyancy
-1.7
0.2
0.1
-0.1
0.2
growth on ricinoleic acid
YNB Ricinoleic Acid
0.3
0.5
-0.7
-0.1
-0.9
ypd buoyancy
40 hrs Low Buoyancy
-0.4
0.3
-0.7
-0.2
0.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.1
0.3
-0.8
-0.2
-0.1
growth on oleic acid
YNB Oleic Acid
0.6
-0.1
-0.8
-0.2
-0.3
auxotrophy
Dropout Complete
-0.4
0.0
0.1
-0.4
-0.3
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-1.1
0.3
-0.1
0.2
0.1
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.7
0.3
-0.3
0.0
0.0
auxotrophy
YNB Glucose 75mM Arginine
-0.1
0.2
-0.3
-0.2
-0.1
growth on ricinoleic acid
YNB Methylricinoleic Acid
0.9
0.4
-0.8
-0.0
-0.7
auxotrophy
YNB Glucose 75mM Methionine
-0.1
0.4
-0.2
-0.3
0.1
growth on ricinoleic acid
YNB Glucose
0.6
0.3
-0.1
-0.0
-0.6
facs on lipid accumulation
Sorted High BODIPY Gate
0.8
-0.4
0.2
-0.1
-0.0
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.5
0.9
0.1
-0.2
0.2
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.4
0.1
0.9
-0.2
0.1
growth on ypd
YPD
1.9
0.0
-0.6
-0.1
-0.3
ypd buoyancy
40 hrs Median Buoyancy
0.2
0.5
0.4
-0.0
0.0
facs on lipid accumulation
Sorted No BODIPY Gate
0.8
0.2
-0.0
0.1
0.1
growth on oleic acid
YNB Glucose
1.8
0.2
-0.1
-0.2
-0.3
ypd buoyancy
40 hrs No Buoyancy Separation
0.7
0.1
1.0
-0.0
0.1
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