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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_5625: 13993 - KOG1611 Predicted short chain-type dehydrogenase, at 537330 to 538157
13993
mRNA_5626: 13994 - KOG1611 Predicted short chain-type dehydrogenase, at 538805 to 539634
13994
mRNA_5627: 13995 - K10756 RFC3_5 replication factor C subunit 3/5, at 539729 to 541360
13995
mRNA_5628: 13996 - SUPERFAMILY--SSF57997, at 541523 to 547167
13996
mRNA_5629: 13997 - K15430 TRM11, TRMT11 tRNA (guanine10-N2)-methyltransferase, at 547536 to 549644
13997
Group
Condition
mRNA_5625
mRNA_5626
mRNA_5627
mRNA_5628
mRNA_5629
13993
13994
13995
13996
13997
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.3
-0.2
0.1
-0.4
ypd buoyancy
40 hrs Low Buoyancy
0.3
-0.6
0.0
-0.3
ypd buoyancy
40 hrs No Buoyancy Separation
0.2
-0.4
0.0
-0.0
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.4
0.3
-0.0
-0.1
ypd buoyancy
40 hrs Median Buoyancy
0.2
-0.2
0.0
-0.1
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.2
0.5
0.0
-0.4
ypd buoyancy
40 hrs High Buoyancy
0.0
-0.0
0.1
-0.1
growth on ricinoleic acid
YNB Glucose
-0.1
0.2
-0.0
-0.1
growth on ypd
YPD
0.2
-0.0
0.1
-0.2
auxotrophy
YNB Glucose 75mM Arginine
0.2
0.0
-0.1
-0.1
auxotrophy
YNB Glucose 75mM Methionine
0.2
0.1
0.1
-0.2
facs on lipid accumulation
Sorted No BODIPY Gate
-0.1
0.1
0.2
0.2
auxotrophy
Dropout Complete
0.6
0.2
-0.0
-0.2
growth on oleic acid
YNB Oleic Acid
0.3
0.2
-0.1
0.1
growth on oleic acid
YNB Glucose
0.2
0.3
0.1
-0.1
facs on lipid accumulation
Sorted High BODIPY Gate
-0.2
0.6
0.2
-0.0
auxotrophy
YNB Glucose
0.6
0.1
0.0
-0.1
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.4
1.2
-0.1
0.1
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.4
1.0
0.1
0.3
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.4
1.2
0.2
0.2
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.3
1.2
0.1
0.3
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