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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_5624: 13992 - KOG1611 Predicted short chain-type dehydrogenase, at 535753 to 536555
13992
mRNA_5625: 13993 - KOG1611 Predicted short chain-type dehydrogenase, at 537330 to 538157
13993
mRNA_5626: 13994 - KOG1611 Predicted short chain-type dehydrogenase, at 538805 to 539634
13994
mRNA_5627: 13995 - K10756 RFC3_5 replication factor C subunit 3/5, at 539729 to 541360
13995
mRNA_5628: 13996 - SUPERFAMILY--SSF57997, at 541523 to 547167
13996
Group
Condition
mRNA_5624
mRNA_5625
mRNA_5626
mRNA_5627
mRNA_5628
13992
13993
13994
13995
13996
growth on ricinoleic acid
YNB Ricinoleic Acid
-3.2
-0.4
0.3
-0.0
ypd buoyancy
40 hrs No Buoyancy Separation
-2.0
0.2
-0.4
0.0
growth on oleic acid
YNB Oleic Acid
-2.3
0.3
0.2
-0.1
facs on lipid accumulation
Sorted Low BODIPY Gate
-1.5
-0.3
-0.2
0.1
growth on ricinoleic acid
YNB Methylricinoleic Acid
-1.9
-0.2
0.5
0.0
ypd buoyancy
40 hrs Median Buoyancy
0.2
0.2
-0.2
0.0
ypd buoyancy
40 hrs Low Buoyancy
0.6
0.3
-0.6
0.0
growth on ricinoleic acid
YNB Glucose
0.4
-0.1
0.2
-0.0
growth on ypd
YPD
0.5
0.2
-0.0
0.1
facs on lipid accumulation
Sorted No BODIPY Gate
0.6
-0.1
0.1
0.2
growth on oleic acid
YNB Glucose
0.3
0.2
0.3
0.1
ypd buoyancy
40 hrs High Buoyancy
0.8
0.0
-0.0
0.1
auxotrophy
YNB Glucose 75mM Methionine
1.0
0.2
0.1
0.1
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
0.7
-0.4
1.2
-0.1
facs on lipid accumulation
Sorted High BODIPY Gate
0.8
-0.2
0.6
0.2
buoyancy on lipid accumulation
40 hrs High Buoyancy
0.9
-0.4
1.0
0.1
auxotrophy
YNB Glucose 75mM Arginine
1.5
0.2
0.0
-0.1
buoyancy on lipid accumulation
40 hrs Median Buoyancy
0.8
-0.3
1.2
0.1
auxotrophy
Dropout Complete
1.5
0.6
0.2
-0.0
auxotrophy
YNB Glucose
1.8
0.6
0.1
0.0
buoyancy on lipid accumulation
40 hrs Low Buoyancy
1.8
-0.4
1.2
0.2
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