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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_5622: 13990 - K00849 galK galactokinase, at 531659 to 534063
13990
mRNA_5623: 13991 - KOG3393 Predicted membrane protein, at 534281 to 535136
13991
mRNA_5624: 13992 - KOG1611 Predicted short chain-type dehydrogenase, at 535753 to 536555
13992
mRNA_5625: 13993 - KOG1611 Predicted short chain-type dehydrogenase, at 537330 to 538157
13993
mRNA_5626: 13994 - KOG1611 Predicted short chain-type dehydrogenase, at 538805 to 539634
13994
Group
Condition
mRNA_5622
mRNA_5623
mRNA_5624
mRNA_5625
mRNA_5626
13990
13991
13992
13993
13994
growth on ricinoleic acid
YNB Ricinoleic Acid
0.0
-0.0
-3.2
-0.4
0.3
facs on lipid accumulation
Sorted Low BODIPY Gate
0.2
-1.3
-1.5
-0.3
-0.2
growth on oleic acid
YNB Oleic Acid
-0.1
-0.3
-2.3
0.3
0.2
ypd buoyancy
40 hrs No Buoyancy Separation
-0.4
0.6
-2.0
0.2
-0.4
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.1
0.2
-1.9
-0.2
0.5
ypd buoyancy
40 hrs Low Buoyancy
-0.1
0.1
0.6
0.3
-0.6
facs on lipid accumulation
Sorted High BODIPY Gate
-0.1
-0.8
0.8
-0.2
0.6
ypd buoyancy
40 hrs Median Buoyancy
0.2
0.0
0.2
0.2
-0.2
facs on lipid accumulation
Sorted No BODIPY Gate
0.2
-0.3
0.6
-0.1
0.1
growth on ypd
YPD
-0.2
0.3
0.5
0.2
-0.0
growth on ricinoleic acid
YNB Glucose
0.1
0.2
0.4
-0.1
0.2
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.0
-0.7
0.7
-0.4
1.2
ypd buoyancy
40 hrs High Buoyancy
-0.0
0.0
0.8
0.0
-0.0
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.2
-0.6
0.8
-0.3
1.2
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.3
-0.2
0.9
-0.4
1.0
growth on oleic acid
YNB Glucose
0.1
0.1
0.3
0.2
0.3
auxotrophy
YNB Glucose 75mM Arginine
0.2
-0.3
1.5
0.2
0.0
auxotrophy
YNB Glucose 75mM Methionine
0.3
0.1
1.0
0.2
0.1
auxotrophy
Dropout Complete
0.1
-0.3
1.5
0.6
0.2
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.1
-0.1
1.8
-0.4
1.2
auxotrophy
YNB Glucose
0.3
-0.3
1.8
0.6
0.1
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