Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_5620: 13988 - HMMPfam-GRF zinc finger-PF06839, at 528663 to 529956 13988 mRNA_5621: 13989 - Hypothetical Protein, at 530337 to 531503 13989 mRNA_5622: 13990 - K00849 galK galactokinase, at 531659 to 534063 13990 mRNA_5623: 13991 - KOG3393 Predicted membrane protein, at 534281 to 535136 13991 mRNA_5624: 13992 - KOG1611 Predicted short chain-type dehydrogenase, at 535753 to 536555 13992
Group Condition mRNA_5620 mRNA_5621 mRNA_5622 mRNA_5623 mRNA_5624
13988
13989
13990
13991
13992
growth on ricinoleic acid YNB Ricinoleic Acid -1.8 -1.5 0.0 -0.0 -3.2
growth on oleic acid YNB Oleic Acid -0.6 0.1 -0.1 -0.3 -2.3
growth on ricinoleic acid YNB Methylricinoleic Acid -0.0 -0.9 -0.1 0.2 -1.9
ypd buoyancy 40 hrs No Buoyancy Separation -0.8 0.1 -0.4 0.6 -2.0
auxotrophy Dropout Complete -1.7 -0.3 0.1 -0.3 1.5
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.4 0.1 -0.0 -0.7 0.7
facs on lipid accumulation Sorted High BODIPY Gate 0.7 -0.9 -0.1 -0.8 0.8
facs on lipid accumulation Sorted Low BODIPY Gate 2.0 0.6 0.2 -1.3 -1.5
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.3 -0.3 -0.2 -0.6 0.8
auxotrophy YNB Glucose -1.5 -0.1 0.3 -0.3 1.8
growth on ricinoleic acid YNB Glucose -0.8 0.3 0.1 0.2 0.4
auxotrophy YNB Glucose 75mM Arginine -0.8 -0.3 0.2 -0.3 1.5
growth on ypd YPD -0.1 0.1 -0.2 0.3 0.5
growth on oleic acid YNB Glucose -0.4 0.6 0.1 0.1 0.3
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.9 -0.2 -0.3 -0.2 0.9
ypd buoyancy 40 hrs High Buoyancy 1.0 -0.7 -0.0 0.0 0.8
auxotrophy YNB Glucose 75mM Methionine -0.2 -0.0 0.3 0.1 1.0
facs on lipid accumulation Sorted No BODIPY Gate 2.1 -1.1 0.2 -0.3 0.6
ypd buoyancy 40 hrs Median Buoyancy 1.5 -0.1 0.2 0.0 0.2
ypd buoyancy 40 hrs Low Buoyancy 1.9 -0.2 -0.1 0.1 0.6
buoyancy on lipid accumulation 40 hrs Low Buoyancy 1.9 0.4 -0.1 -0.1 1.8
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