Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_5616: 13984 - HMMPfam-GRF zinc finger-PF06839, at 521417 to 522202 13984 mRNA_5617: 13985 - BLAST beta-flanking protein [Kwoniella dejecticola CBS ..., at 522586 to 523883 13985 mRNA_5618: 13986 - K09866 AQP4 aquaporin-4, at 524423 to 526190 13986 mRNA_5619: 13987 - K09885 AQPF aquaporin rerated protein, other eukaryote, at 526532 to 528365 13987 mRNA_5620: 13988 - HMMPfam-GRF zinc finger-PF06839, at 528663 to 529956 13988
Group Condition mRNA_5616 mRNA_5617 mRNA_5618 mRNA_5619 mRNA_5620
13984
13985
13986
13987
13988
growth on ricinoleic acid YNB Ricinoleic Acid -0.9 -0.1 0.3 -0.7 -1.8
ypd buoyancy 40 hrs No Buoyancy Separation -2.1 -0.4 0.6 -0.4 -0.8
facs on lipid accumulation Sorted High BODIPY Gate -1.4 -0.1 -0.4 -1.0 0.7
growth on ricinoleic acid YNB Glucose -1.2 0.6 0.5 0.1 -0.8
growth on oleic acid YNB Oleic Acid -1.0 0.3 0.3 0.3 -0.6
auxotrophy Dropout Complete 1.1 -0.0 0.0 -0.0 -1.7
facs on lipid accumulation Sorted Low BODIPY Gate -0.9 -0.2 -0.7 -0.8 2.0
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.2 -0.1 0.1 -0.2 -0.4
growth on oleic acid YNB Glucose -0.9 0.2 0.3 0.5 -0.4
facs on lipid accumulation Sorted No BODIPY Gate -0.5 0.2 -0.8 -1.2 2.1
auxotrophy YNB Glucose 0.9 0.5 0.1 -0.2 -1.5
growth on ricinoleic acid YNB Methylricinoleic Acid -1.2 1.0 0.4 -0.1 -0.0
ypd buoyancy 40 hrs High Buoyancy -0.5 -0.5 -0.3 0.5 1.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.2 -0.2 0.1 0.3 0.3
auxotrophy YNB Glucose 75mM Arginine 1.0 0.1 0.1 -0.2 -0.8
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.5 0.1 0.3 0.1 0.9
growth on ypd YPD -0.4 -0.4 0.4 1.6 -0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.1 -0.5 0.2 0.1 1.9
auxotrophy YNB Glucose 75mM Methionine 1.8 0.2 0.3 -0.1 -0.2
ypd buoyancy 40 hrs Low Buoyancy 0.3 -0.4 0.2 0.1 1.9
ypd buoyancy 40 hrs Median Buoyancy 0.8 -0.2 0.5 0.5 1.5
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