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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_5616: 13984 - HMMPfam-GRF zinc finger-PF06839, at 521417 to 522202
13984
mRNA_5617: 13985 - BLAST beta-flanking protein [Kwoniella dejecticola CBS ..., at 522586 to 523883
13985
mRNA_5618: 13986 - K09866 AQP4 aquaporin-4, at 524423 to 526190
13986
mRNA_5619: 13987 - K09885 AQPF aquaporin rerated protein, other eukaryote, at 526532 to 528365
13987
mRNA_5620: 13988 - HMMPfam-GRF zinc finger-PF06839, at 528663 to 529956
13988
Group
Condition
mRNA_5616
mRNA_5617
mRNA_5618
mRNA_5619
mRNA_5620
13984
13985
13986
13987
13988
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.9
-0.1
0.3
-0.7
-1.8
ypd buoyancy
40 hrs No Buoyancy Separation
-2.1
-0.4
0.6
-0.4
-0.8
facs on lipid accumulation
Sorted High BODIPY Gate
-1.4
-0.1
-0.4
-1.0
0.7
growth on ricinoleic acid
YNB Glucose
-1.2
0.6
0.5
0.1
-0.8
growth on oleic acid
YNB Oleic Acid
-1.0
0.3
0.3
0.3
-0.6
auxotrophy
Dropout Complete
1.1
-0.0
0.0
-0.0
-1.7
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.9
-0.2
-0.7
-0.8
2.0
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
0.2
-0.1
0.1
-0.2
-0.4
growth on oleic acid
YNB Glucose
-0.9
0.2
0.3
0.5
-0.4
facs on lipid accumulation
Sorted No BODIPY Gate
-0.5
0.2
-0.8
-1.2
2.1
auxotrophy
YNB Glucose
0.9
0.5
0.1
-0.2
-1.5
growth on ricinoleic acid
YNB Methylricinoleic Acid
-1.2
1.0
0.4
-0.1
-0.0
ypd buoyancy
40 hrs High Buoyancy
-0.5
-0.5
-0.3
0.5
1.0
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.2
-0.2
0.1
0.3
0.3
auxotrophy
YNB Glucose 75mM Arginine
1.0
0.1
0.1
-0.2
-0.8
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.5
0.1
0.3
0.1
0.9
growth on ypd
YPD
-0.4
-0.4
0.4
1.6
-0.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
0.1
-0.5
0.2
0.1
1.9
auxotrophy
YNB Glucose 75mM Methionine
1.8
0.2
0.3
-0.1
-0.2
ypd buoyancy
40 hrs Low Buoyancy
0.3
-0.4
0.2
0.1
1.9
ypd buoyancy
40 hrs Median Buoyancy
0.8
-0.2
0.5
0.5
1.5
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