Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_5593: 13961 - K00905 BCKDK [3-methyl-2-oxobutanoate dehydrogenase (acetyl-transferring)] kinase, at 463128 to 464888 13961 mRNA_5594: 13962 - K07943 ARL2 ADP-ribosylation factor-like protein 2, at 465150 to 466141 13962 mRNA_5595: 13963 - K11294 NCL, NSR1 nucleolin, at 466415 to 467468 13963 mRNA_5596: 13964 - KOG2806 Chitinase, at 469041 to 471762 13964 mRNA_5597: 13965 - Hypothetical Protein, at 472641 to 473822 13965
Group Condition mRNA_5593 mRNA_5594 mRNA_5595 mRNA_5596 mRNA_5597
13961
13962
13963
13964
13965
facs on lipid accumulation Sorted Low BODIPY Gate 0.1 -1.1   -0.7 -0.2
ypd buoyancy 40 hrs No Buoyancy Separation -0.3 -1.3   -0.2 0.3
auxotrophy YNB Glucose 75mM Methionine 0.0 -0.6   -0.2 -0.5
facs on lipid accumulation Sorted High BODIPY Gate -0.3 -1.2   0.4 -0.1
auxotrophy YNB Glucose 75mM Arginine -0.0 -0.6   -0.1 -0.4
growth on oleic acid YNB Glucose 0.1 -0.2   -0.3 -0.5
facs on lipid accumulation Sorted No BODIPY Gate 0.1 -0.8   -0.0 -0.2
growth on oleic acid YNB Oleic Acid -0.1 -0.5   0.1 -0.3
auxotrophy Dropout Complete -0.0 -0.3   0.3 -0.5
auxotrophy YNB Glucose -0.0 -0.4   0.2 -0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.1 -0.3   -0.1 -0.1
ypd buoyancy 40 hrs Median Buoyancy -0.0 0.6   -0.5 -0.4
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.0 0.2   -0.1 0.1
ypd buoyancy 40 hrs Low Buoyancy -0.1 0.2   0.2 -0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.3 0.1   0.2 -0.4
ypd buoyancy 40 hrs High Buoyancy 0.2 1.0   -0.6 -0.2
growth on ypd YPD 0.2 -0.1   0.7 -0.3
growth on ricinoleic acid YNB Methylricinoleic Acid -0.1 0.3   0.5 0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.1 0.3   0.3 0.6
growth on ricinoleic acid YNB Glucose -0.1 1.1   0.3 0.1
growth on ricinoleic acid YNB Ricinoleic Acid 0.0 1.3   0.7 0.1
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