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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_5593: 13961 - K00905 BCKDK [3-methyl-2-oxobutanoate dehydrogenase (acetyl-transferring)] kinase, at 463128 to 464888
13961
mRNA_5594: 13962 - K07943 ARL2 ADP-ribosylation factor-like protein 2, at 465150 to 466141
13962
mRNA_5595: 13963 - K11294 NCL, NSR1 nucleolin, at 466415 to 467468
13963
mRNA_5596: 13964 - KOG2806 Chitinase, at 469041 to 471762
13964
mRNA_5597: 13965 - Hypothetical Protein, at 472641 to 473822
13965
Group
Condition
mRNA_5593
mRNA_5594
mRNA_5595
mRNA_5596
mRNA_5597
13961
13962
13963
13964
13965
facs on lipid accumulation
Sorted Low BODIPY Gate
0.1
-1.1
-0.7
-0.2
ypd buoyancy
40 hrs No Buoyancy Separation
-0.3
-1.3
-0.2
0.3
auxotrophy
YNB Glucose 75mM Methionine
0.0
-0.6
-0.2
-0.5
facs on lipid accumulation
Sorted High BODIPY Gate
-0.3
-1.2
0.4
-0.1
auxotrophy
YNB Glucose 75mM Arginine
-0.0
-0.6
-0.1
-0.4
growth on oleic acid
YNB Glucose
0.1
-0.2
-0.3
-0.5
facs on lipid accumulation
Sorted No BODIPY Gate
0.1
-0.8
-0.0
-0.2
growth on oleic acid
YNB Oleic Acid
-0.1
-0.5
0.1
-0.3
auxotrophy
Dropout Complete
-0.0
-0.3
0.3
-0.5
auxotrophy
YNB Glucose
-0.0
-0.4
0.2
-0.2
buoyancy on lipid accumulation
40 hrs Median Buoyancy
0.1
-0.3
-0.1
-0.1
ypd buoyancy
40 hrs Median Buoyancy
-0.0
0.6
-0.5
-0.4
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.0
0.2
-0.1
0.1
ypd buoyancy
40 hrs Low Buoyancy
-0.1
0.2
0.2
-0.2
buoyancy on lipid accumulation
40 hrs High Buoyancy
0.3
0.1
0.2
-0.4
ypd buoyancy
40 hrs High Buoyancy
0.2
1.0
-0.6
-0.2
growth on ypd
YPD
0.2
-0.1
0.7
-0.3
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.1
0.3
0.5
0.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
0.1
0.3
0.3
0.6
growth on ricinoleic acid
YNB Glucose
-0.1
1.1
0.3
0.1
growth on ricinoleic acid
YNB Ricinoleic Acid
0.0
1.3
0.7
0.1
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