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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_5587: 13955 - KOG0255 Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily), at 442460 to 444934
13955
mRNA_5588: 13956 - K04646 CLTC clathrin heavy chain, at 445345 to 451026
13956
mRNA_5589: 13957 - HMMPfam-Region in Clathrin and VPS-PF00637,ProSiteProfiles-Clathrin heavy-chain (CHCR) repeat profile.-PS50236,SMART-Clathrin heavy chain repeat homology-SM00299,SUPERFAMILY--SSF48371, at 452647 to 453380
13957
mRNA_5590: 13958 - K11137 TELO2, TEL2 telomere length regulation protein, at 453497 to 457057
13958
mRNA_5591: 13959 - K11182 AOC1, ABP1 diamine oxidase, at 458129 to 461343
13959
Group
Condition
mRNA_5587
mRNA_5588
mRNA_5589
mRNA_5590
mRNA_5591
13955
13956
13957
13958
13959
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.6
-0.3
0.1
facs on lipid accumulation
Sorted High BODIPY Gate
0.2
-0.8
-0.0
growth on ricinoleic acid
YNB Glucose
-0.5
-0.2
0.1
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
0.5
-0.5
-0.4
growth on oleic acid
YNB Oleic Acid
-0.2
-0.3
0.1
facs on lipid accumulation
Sorted Low BODIPY Gate
0.2
-0.3
0.1
ypd buoyancy
40 hrs Median Buoyancy
-0.0
0.2
-0.1
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.3
0.3
0.3
growth on oleic acid
YNB Glucose
-0.3
0.5
0.1
buoyancy on lipid accumulation
40 hrs Median Buoyancy
0.4
0.1
-0.2
facs on lipid accumulation
Sorted No BODIPY Gate
0.1
0.1
0.1
ypd buoyancy
40 hrs Low Buoyancy
0.1
0.2
0.1
auxotrophy
YNB Glucose 75mM Arginine
-0.3
0.6
0.2
auxotrophy
YNB Glucose
-0.1
0.5
0.0
buoyancy on lipid accumulation
40 hrs High Buoyancy
0.3
0.1
0.1
auxotrophy
Dropout Complete
-0.1
0.7
0.0
growth on ypd
YPD
0.3
0.1
0.2
ypd buoyancy
40 hrs High Buoyancy
0.2
0.5
-0.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
0.2
0.4
0.2
auxotrophy
YNB Glucose 75mM Methionine
0.0
0.9
-0.0
ypd buoyancy
40 hrs No Buoyancy Separation
0.3
1.0
0.4
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