Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_5585: 13953 - HMMPfam-PB1 domain-PF00564,SUPERFAMILY--SSF54277, at 438946 to 439812 13953 mRNA_5586: 13954 - HMMPfam-Response regulator receiver domain-PF00072,HMMPfam-Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase-PF02518,ProSiteProfiles-Response regulatory domain profile.-PS50110,SMART-cheY-homologous receiver domain-SM00448,SUPERFAMILY--SSF52172,SUPERFAMILY--SSF55874, at 440845 to 442225 13954 mRNA_5587: 13955 - KOG0255 Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily), at 442460 to 444934 13955 mRNA_5588: 13956 - K04646 CLTC clathrin heavy chain, at 445345 to 451026 13956 mRNA_5589: 13957 - HMMPfam-Region in Clathrin and VPS-PF00637,ProSiteProfiles-Clathrin heavy-chain (CHCR) repeat profile.-PS50236,SMART-Clathrin heavy chain repeat homology-SM00299,SUPERFAMILY--SSF48371, at 452647 to 453380 13957
Group Condition mRNA_5585 mRNA_5586 mRNA_5587 mRNA_5588 mRNA_5589
13953
13954
13955
13956
13957
growth on ricinoleic acid YNB Methylricinoleic Acid 0.2 -0.4 -0.6   -0.3
facs on lipid accumulation Sorted High BODIPY Gate -0.2 0.1 0.2   -0.8
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.5 0.0 0.5   -0.5
growth on ricinoleic acid YNB Glucose 0.5 -0.2 -0.5   -0.2
facs on lipid accumulation Sorted Low BODIPY Gate -0.3 0.1 0.2   -0.3
growth on oleic acid YNB Oleic Acid 0.2 0.0 -0.2   -0.3
facs on lipid accumulation Sorted No BODIPY Gate -0.5 0.0 0.1   0.1
auxotrophy YNB Glucose -0.1 -0.2 -0.1   0.5
growth on ricinoleic acid YNB Ricinoleic Acid 0.4 -0.2 -0.3   0.3
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.2 -0.0 0.4   0.1
ypd buoyancy 40 hrs Low Buoyancy -0.1 0.1 0.1   0.2
auxotrophy YNB Glucose 75mM Arginine 0.1 -0.0 -0.3   0.6
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.2 0.1 0.3   0.1
ypd buoyancy 40 hrs Median Buoyancy 0.0 0.2 -0.0   0.2
auxotrophy Dropout Complete -0.0 -0.2 -0.1   0.7
growth on oleic acid YNB Glucose 0.3 -0.1 -0.3   0.5
growth on ypd YPD 0.2 -0.1 0.3   0.1
ypd buoyancy 40 hrs High Buoyancy -0.1 0.1 0.2   0.5
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.1 0.1 0.2   0.4
auxotrophy YNB Glucose 75mM Methionine 0.2 -0.2 0.0   0.9
ypd buoyancy 40 hrs No Buoyancy Separation 0.1 0.4 0.3   1.0
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