Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_5584: 13952 - K14780 DHX37, DHR1 ATP-dependent RNA helicase DHX37/DHR1, at 434778 to 438176 13952 mRNA_5585: 13953 - HMMPfam-PB1 domain-PF00564,SUPERFAMILY--SSF54277, at 438946 to 439812 13953 mRNA_5586: 13954 - HMMPfam-Response regulator receiver domain-PF00072,HMMPfam-Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase-PF02518,ProSiteProfiles-Response regulatory domain profile.-PS50110,SMART-cheY-homologous receiver domain-SM00448,SUPERFAMILY--SSF52172,SUPERFAMILY--SSF55874, at 440845 to 442225 13954 mRNA_5587: 13955 - KOG0255 Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily), at 442460 to 444934 13955 mRNA_5588: 13956 - K04646 CLTC clathrin heavy chain, at 445345 to 451026 13956
Group Condition mRNA_5584 mRNA_5585 mRNA_5586 mRNA_5587 mRNA_5588
13952
13953
13954
13955
13956
growth on ricinoleic acid YNB Methylricinoleic Acid   0.2 -0.4 -0.6  
auxotrophy YNB Glucose   -0.1 -0.2 -0.1  
facs on lipid accumulation Sorted No BODIPY Gate   -0.5 0.0 0.1  
auxotrophy Dropout Complete   -0.0 -0.2 -0.1  
auxotrophy YNB Glucose 75mM Arginine   0.1 -0.0 -0.3  
growth on ricinoleic acid YNB Glucose   0.5 -0.2 -0.5  
growth on ricinoleic acid YNB Ricinoleic Acid   0.4 -0.2 -0.3  
facs on lipid accumulation Sorted Low BODIPY Gate   -0.3 0.1 0.2  
growth on oleic acid YNB Glucose   0.3 -0.1 -0.3  
growth on oleic acid YNB Oleic Acid   0.2 0.0 -0.2  
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation   -0.5 0.0 0.5  
ypd buoyancy 40 hrs Low Buoyancy   -0.1 0.1 0.1  
facs on lipid accumulation Sorted High BODIPY Gate   -0.2 0.1 0.2  
auxotrophy YNB Glucose 75mM Methionine   0.2 -0.2 0.0  
ypd buoyancy 40 hrs Median Buoyancy   0.0 0.2 -0.0  
buoyancy on lipid accumulation 40 hrs Median Buoyancy   -0.2 -0.0 0.4  
ypd buoyancy 40 hrs High Buoyancy   -0.1 0.1 0.2  
buoyancy on lipid accumulation 40 hrs High Buoyancy   -0.2 0.1 0.3  
growth on ypd YPD   0.2 -0.1 0.3  
buoyancy on lipid accumulation 40 hrs Low Buoyancy   0.1 0.1 0.2  
ypd buoyancy 40 hrs No Buoyancy Separation   0.1 0.4 0.3  
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