Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_5579: 13947 - HMMPfam-Zinc-binding dehydrogenase-PF00107,HMMPfam-Alcohol dehydrogenase GroES-like domain-PF08240,SUPERFAMILY--SSF50129,SUPERFAMILY--SSF51735, at 422272 to 423518 13947 mRNA_5580: 13948 - K00162 PDHB, pdhB pyruvate dehydrogenase E1 component beta subunit, at 424310 to 425729 13948 mRNA_5581: 13949 - KOG1198 Zinc-binding oxidoreductase, at 426490 to 430753 13949 mRNA_5582: 13950 - KOG0254 Predicted transporter (major facilitator superfamily), at 431120 to 432974 13950 mRNA_5583: 13951 - BLAST putative ATP-dependent RNA helicase DHR1 [Wallemi..., at 433423 to 434660 13951
Group Condition mRNA_5579 mRNA_5580 mRNA_5581 mRNA_5582 mRNA_5583
13947
13948
13949
13950
13951
facs on lipid accumulation Sorted No BODIPY Gate -0.1   -0.5 -0.5  
ypd buoyancy 40 hrs Low Buoyancy -0.5   -0.4 0.1  
facs on lipid accumulation Sorted High BODIPY Gate -0.2   0.2 -0.7  
growth on oleic acid YNB Oleic Acid 0.3   -0.1 -0.5  
auxotrophy Dropout Complete -0.7   0.4 -0.0  
auxotrophy YNB Glucose -0.7   0.5 0.1  
ypd buoyancy 40 hrs Median Buoyancy -0.2   0.0 0.2  
ypd buoyancy 40 hrs High Buoyancy 0.0   -0.1 0.2  
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.5   -0.1 -0.3  
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.4   -0.0 -0.2  
growth on ricinoleic acid YNB Methylricinoleic Acid -0.2   0.1 0.2  
growth on oleic acid YNB Glucose 0.5   -0.2 -0.1  
ypd buoyancy 40 hrs No Buoyancy Separation 0.7   -0.5 -0.0  
auxotrophy YNB Glucose 75mM Arginine -0.3   0.3 0.2  
facs on lipid accumulation Sorted Low BODIPY Gate 0.3   -0.1 0.1  
growth on ricinoleic acid YNB Glucose -0.1   0.0 0.5  
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.5   0.1 -0.1  
auxotrophy YNB Glucose 75mM Methionine -0.4   0.8 0.1  
growth on ricinoleic acid YNB Ricinoleic Acid 0.3   0.3 0.2  
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.6   0.1 0.1  
growth on ypd YPD 0.5   0.5 0.3  
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