Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_5578: 13946 - HMMPfam-HMG (high mobility group) box-PF00505,ProSiteProfiles-HMG boxes A and B DNA-binding domains profile.-PS50118,SMART-high mobility group-SM00398,SUPERFAMILY--SSF47095, at 419632 to 421061 13946 mRNA_5579: 13947 - HMMPfam-Zinc-binding dehydrogenase-PF00107,HMMPfam-Alcohol dehydrogenase GroES-like domain-PF08240,SUPERFAMILY--SSF50129,SUPERFAMILY--SSF51735, at 422272 to 423518 13947 mRNA_5580: 13948 - K00162 PDHB, pdhB pyruvate dehydrogenase E1 component beta subunit, at 424310 to 425729 13948 mRNA_5581: 13949 - KOG1198 Zinc-binding oxidoreductase, at 426490 to 430753 13949 mRNA_5582: 13950 - KOG0254 Predicted transporter (major facilitator superfamily), at 431120 to 432974 13950
Group Condition mRNA_5578 mRNA_5579 mRNA_5580 mRNA_5581 mRNA_5582
13946
13947
13948
13949
13950
facs on lipid accumulation Sorted No BODIPY Gate   -0.1   -0.5 -0.5
ypd buoyancy 40 hrs Low Buoyancy   -0.5   -0.4 0.1
facs on lipid accumulation Sorted High BODIPY Gate   -0.2   0.2 -0.7
growth on oleic acid YNB Oleic Acid   0.3   -0.1 -0.5
auxotrophy Dropout Complete   -0.7   0.4 -0.0
auxotrophy YNB Glucose   -0.7   0.5 0.1
ypd buoyancy 40 hrs Median Buoyancy   -0.2   0.0 0.2
ypd buoyancy 40 hrs High Buoyancy   0.0   -0.1 0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy   0.5   -0.1 -0.3
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation   0.4   -0.0 -0.2
growth on ricinoleic acid YNB Methylricinoleic Acid   -0.2   0.1 0.2
growth on oleic acid YNB Glucose   0.5   -0.2 -0.1
ypd buoyancy 40 hrs No Buoyancy Separation   0.7   -0.5 -0.0
auxotrophy YNB Glucose 75mM Arginine   -0.3   0.3 0.2
facs on lipid accumulation Sorted Low BODIPY Gate   0.3   -0.1 0.1
growth on ricinoleic acid YNB Glucose   -0.1   0.0 0.5
buoyancy on lipid accumulation 40 hrs Median Buoyancy   0.5   0.1 -0.1
auxotrophy YNB Glucose 75mM Methionine   -0.4   0.8 0.1
growth on ricinoleic acid YNB Ricinoleic Acid   0.3   0.3 0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy   0.6   0.1 0.1
growth on ypd YPD   0.5   0.5 0.3
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