Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_5577: 13945 - Hypothetical Protein, at 418154 to 419235 13945 mRNA_5578: 13946 - HMMPfam-HMG (high mobility group) box-PF00505,ProSiteProfiles-HMG boxes A and B DNA-binding domains profile.-PS50118,SMART-high mobility group-SM00398,SUPERFAMILY--SSF47095, at 419632 to 421061 13946 mRNA_5579: 13947 - HMMPfam-Zinc-binding dehydrogenase-PF00107,HMMPfam-Alcohol dehydrogenase GroES-like domain-PF08240,SUPERFAMILY--SSF50129,SUPERFAMILY--SSF51735, at 422272 to 423518 13947 mRNA_5580: 13948 - K00162 PDHB, pdhB pyruvate dehydrogenase E1 component beta subunit, at 424310 to 425729 13948 mRNA_5581: 13949 - KOG1198 Zinc-binding oxidoreductase, at 426490 to 430753 13949
Group Condition mRNA_5577 mRNA_5578 mRNA_5579 mRNA_5580 mRNA_5581
13945
13946
13947
13948
13949
ypd buoyancy 40 hrs Low Buoyancy 0.1   -0.5   -0.4
ypd buoyancy 40 hrs High Buoyancy -0.2   0.0   -0.1
facs on lipid accumulation Sorted No BODIPY Gate 0.3   -0.1   -0.5
ypd buoyancy 40 hrs Median Buoyancy -0.1   -0.2   0.0
facs on lipid accumulation Sorted High BODIPY Gate -0.1   -0.2   0.2
auxotrophy Dropout Complete 0.3   -0.7   0.4
ypd buoyancy 40 hrs No Buoyancy Separation -0.2   0.7   -0.5
auxotrophy YNB Glucose 0.2   -0.7   0.5
auxotrophy YNB Glucose 75mM Arginine 0.2   -0.3   0.3
growth on oleic acid YNB Oleic Acid 0.1   0.3   -0.1
growth on ricinoleic acid YNB Glucose 0.5   -0.1   0.0
facs on lipid accumulation Sorted Low BODIPY Gate 0.2   0.3   -0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.2   0.6   0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.2   0.4   -0.0
growth on ricinoleic acid YNB Methylricinoleic Acid 0.6   -0.2   0.1
growth on ricinoleic acid YNB Ricinoleic Acid 0.0   0.3   0.3
growth on oleic acid YNB Glucose 0.5   0.5   -0.2
auxotrophy YNB Glucose 75mM Methionine 0.4   -0.4   0.8
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.5   0.5   -0.1
growth on ypd YPD -0.1   0.5   0.5
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.5   0.5   0.1
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