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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_5576: 13944 - Interpro GDP-fucose protein O-fucosyltransferase, at 415685 to 417537
13944
mRNA_5577: 13945 - Hypothetical Protein, at 418154 to 419235
13945
mRNA_5578: 13946 - HMMPfam-HMG (high mobility group) box-PF00505,ProSiteProfiles-HMG boxes A and B DNA-binding domains profile.-PS50118,SMART-high mobility group-SM00398,SUPERFAMILY--SSF47095, at 419632 to 421061
13946
mRNA_5579: 13947 - HMMPfam-Zinc-binding dehydrogenase-PF00107,HMMPfam-Alcohol dehydrogenase GroES-like domain-PF08240,SUPERFAMILY--SSF50129,SUPERFAMILY--SSF51735, at 422272 to 423518
13947
mRNA_5580: 13948 - K00162 PDHB, pdhB pyruvate dehydrogenase E1 component beta subunit, at 424310 to 425729
13948
Group
Condition
mRNA_5576
mRNA_5577
mRNA_5578
mRNA_5579
mRNA_5580
13944
13945
13946
13947
13948
auxotrophy
YNB Glucose
-0.5
0.2
-0.7
auxotrophy
Dropout Complete
-0.1
0.3
-0.7
ypd buoyancy
40 hrs Low Buoyancy
0.1
0.1
-0.5
auxotrophy
YNB Glucose 75mM Arginine
-0.2
0.2
-0.3
auxotrophy
YNB Glucose 75mM Methionine
-0.3
0.4
-0.4
facs on lipid accumulation
Sorted High BODIPY Gate
0.2
-0.1
-0.2
growth on ricinoleic acid
YNB Glucose
-0.5
0.5
-0.1
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.3
0.0
0.3
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.5
0.2
0.4
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.3
0.6
-0.2
growth on oleic acid
YNB Oleic Acid
-0.3
0.1
0.3
ypd buoyancy
40 hrs High Buoyancy
0.3
-0.2
0.0
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.4
0.2
0.3
ypd buoyancy
40 hrs Median Buoyancy
0.5
-0.1
-0.2
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.1
-0.2
0.6
facs on lipid accumulation
Sorted No BODIPY Gate
0.2
0.3
-0.1
growth on ypd
YPD
0.0
-0.1
0.5
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.1
0.5
0.5
ypd buoyancy
40 hrs No Buoyancy Separation
0.4
-0.2
0.7
growth on oleic acid
YNB Glucose
0.0
0.5
0.5
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.0
0.5
0.5
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