Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_5576: 13944 - Interpro GDP-fucose protein O-fucosyltransferase, at 415685 to 417537 13944 mRNA_5577: 13945 - Hypothetical Protein, at 418154 to 419235 13945 mRNA_5578: 13946 - HMMPfam-HMG (high mobility group) box-PF00505,ProSiteProfiles-HMG boxes A and B DNA-binding domains profile.-PS50118,SMART-high mobility group-SM00398,SUPERFAMILY--SSF47095, at 419632 to 421061 13946 mRNA_5579: 13947 - HMMPfam-Zinc-binding dehydrogenase-PF00107,HMMPfam-Alcohol dehydrogenase GroES-like domain-PF08240,SUPERFAMILY--SSF50129,SUPERFAMILY--SSF51735, at 422272 to 423518 13947 mRNA_5580: 13948 - K00162 PDHB, pdhB pyruvate dehydrogenase E1 component beta subunit, at 424310 to 425729 13948
Group Condition mRNA_5576 mRNA_5577 mRNA_5578 mRNA_5579 mRNA_5580
13944
13945
13946
13947
13948
auxotrophy YNB Glucose -0.5 0.2   -0.7  
auxotrophy Dropout Complete -0.1 0.3   -0.7  
ypd buoyancy 40 hrs Low Buoyancy 0.1 0.1   -0.5  
auxotrophy YNB Glucose 75mM Arginine -0.2 0.2   -0.3  
auxotrophy YNB Glucose 75mM Methionine -0.3 0.4   -0.4  
facs on lipid accumulation Sorted High BODIPY Gate 0.2 -0.1   -0.2  
growth on ricinoleic acid YNB Glucose -0.5 0.5   -0.1  
growth on ricinoleic acid YNB Ricinoleic Acid -0.3 0.0   0.3  
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.5 0.2   0.4  
growth on ricinoleic acid YNB Methylricinoleic Acid -0.3 0.6   -0.2  
growth on oleic acid YNB Oleic Acid -0.3 0.1   0.3  
ypd buoyancy 40 hrs High Buoyancy 0.3 -0.2   0.0  
facs on lipid accumulation Sorted Low BODIPY Gate -0.4 0.2   0.3  
ypd buoyancy 40 hrs Median Buoyancy 0.5 -0.1   -0.2  
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.1 -0.2   0.6  
facs on lipid accumulation Sorted No BODIPY Gate 0.2 0.3   -0.1  
growth on ypd YPD 0.0 -0.1   0.5  
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.1 0.5   0.5  
ypd buoyancy 40 hrs No Buoyancy Separation 0.4 -0.2   0.7  
growth on oleic acid YNB Glucose 0.0 0.5   0.5  
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.0 0.5   0.5  
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