Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_5573: 13941 - BLAST Protein priA [Hypsizygus marmoreus], at 409933 to 411114 13941 mRNA_5574: 13942 - K02956 RP-S15, MRPS15, rpsO small subunit ribosomal protein S15, at 413026 to 414164 13942 mRNA_5575: 13943 - K12873 BUD31, G10 bud site selection protein 31, at 414313 to 415303 13943 mRNA_5576: 13944 - Interpro GDP-fucose protein O-fucosyltransferase, at 415685 to 417537 13944 mRNA_5577: 13945 - Hypothetical Protein, at 418154 to 419235 13945
Group Condition mRNA_5573 mRNA_5574 mRNA_5575 mRNA_5576 mRNA_5577
13941
13942
13943
13944
13945
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.1     -0.1 -0.2
facs on lipid accumulation Sorted Low BODIPY Gate -0.3     -0.4 0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.1     -0.5 0.2
growth on oleic acid YNB Oleic Acid -0.1     -0.3 0.1
auxotrophy YNB Glucose 75mM Arginine -0.3     -0.2 0.2
growth on ypd YPD -0.2     0.0 -0.1
auxotrophy YNB Glucose 0.1     -0.5 0.2
growth on ricinoleic acid YNB Ricinoleic Acid 0.1     -0.3 0.0
auxotrophy YNB Glucose 75mM Methionine -0.2     -0.3 0.4
ypd buoyancy 40 hrs High Buoyancy -0.2     0.3 -0.2
facs on lipid accumulation Sorted High BODIPY Gate -0.1     0.2 -0.1
growth on oleic acid YNB Glucose -0.5     0.0 0.5
ypd buoyancy 40 hrs Low Buoyancy -0.1     0.1 0.1
growth on ricinoleic acid YNB Glucose 0.1     -0.5 0.5
auxotrophy Dropout Complete -0.1     -0.1 0.3
growth on ricinoleic acid YNB Methylricinoleic Acid -0.0     -0.3 0.6
facs on lipid accumulation Sorted No BODIPY Gate -0.2     0.2 0.3
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.2     -0.0 0.5
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.1     -0.1 0.5
ypd buoyancy 40 hrs No Buoyancy Separation 0.2     0.4 -0.2
ypd buoyancy 40 hrs Median Buoyancy 0.1     0.5 -0.1
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