Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_5561: 13929 - Hypothetical Protein, at 382634 to 383572 13929 mRNA_5562: 13930 - KOG0257 Kynurenine aminotransferase, glutamine transaminase K, at 383773 to 385239 13930 mRNA_5563: 13931 - K10756 RFC3_5 replication factor C subunit 3/5, at 385624 to 387371 13931 mRNA_5564: 13932 - HMMPfam-Phytanoyl-CoA dioxygenase (PhyH)-PF05721,SUPERFAMILY--SSF51197, at 387473 to 390458 13932 mRNA_5565: 13933 - KOG3033 Predicted PhzC/PhzF-type epimerase, at 391659 to 392676 13933
Group Condition mRNA_5561 mRNA_5562 mRNA_5563 mRNA_5564 mRNA_5565
13929
13930
13931
13932
13933
ypd buoyancy 40 hrs No Buoyancy Separation -2.2 -0.8   -0.5 -0.1
growth on ricinoleic acid YNB Methylricinoleic Acid -0.4 -0.2   -0.2 -0.4
auxotrophy YNB Glucose -0.4 -0.2   -0.1 -0.0
growth on ricinoleic acid YNB Glucose -0.6 -0.0   0.0 -0.2
facs on lipid accumulation Sorted Low BODIPY Gate -1.0 0.2   0.2 -0.1
ypd buoyancy 40 hrs High Buoyancy -0.3 -0.2   -0.1 -0.1
auxotrophy YNB Glucose 75mM Arginine -0.5 -0.1   -0.1 0.1
ypd buoyancy 40 hrs Low Buoyancy -0.1 -0.2   -0.1 -0.3
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.1 -0.6   -0.0 0.1
growth on ypd YPD -0.1 -0.1   0.1 -0.5
auxotrophy YNB Glucose 75mM Methionine -0.3 -0.2   -0.1 0.1
facs on lipid accumulation Sorted No BODIPY Gate -0.0 -0.2   -0.0 -0.2
auxotrophy Dropout Complete -0.3 -0.2   -0.2 0.3
ypd buoyancy 40 hrs Median Buoyancy -0.1 -0.2   -0.0 -0.1
facs on lipid accumulation Sorted High BODIPY Gate -0.1 -0.1   0.2 -0.3
growth on oleic acid YNB Glucose -0.4 0.1   -0.1 0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.1 -0.2   -0.3 0.1
growth on ricinoleic acid YNB Ricinoleic Acid -0.0 -0.0   0.0 -0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.1 -0.4   -0.0 0.2
growth on oleic acid YNB Oleic Acid -0.2 0.3   -0.0 -0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.1 -0.3   0.4 -0.1
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