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Protein
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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_5560: 13928 - BLAST PROTEIN D2013.6 [Ceraceosorus bombacis], at 380962 to 381944
13928
mRNA_5561: 13929 - Hypothetical Protein, at 382634 to 383572
13929
mRNA_5562: 13930 - KOG0257 Kynurenine aminotransferase, glutamine transaminase K, at 383773 to 385239
13930
mRNA_5563: 13931 - K10756 RFC3_5 replication factor C subunit 3/5, at 385624 to 387371
13931
mRNA_5564: 13932 - HMMPfam-Phytanoyl-CoA dioxygenase (PhyH)-PF05721,SUPERFAMILY--SSF51197, at 387473 to 390458
13932
Group
Condition
mRNA_5560
mRNA_5561
mRNA_5562
mRNA_5563
mRNA_5564
13928
13929
13930
13931
13932
ypd buoyancy
40 hrs No Buoyancy Separation
-3.0
-2.2
-0.8
-0.5
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.9
-0.4
-0.2
-0.2
facs on lipid accumulation
Sorted High BODIPY Gate
-1.5
-0.1
-0.1
0.2
growth on ypd
YPD
-0.8
-0.1
-0.1
0.1
ypd buoyancy
40 hrs Low Buoyancy
-0.4
-0.1
-0.2
-0.1
ypd buoyancy
40 hrs Median Buoyancy
-0.5
-0.1
-0.2
-0.0
ypd buoyancy
40 hrs High Buoyancy
-0.2
-0.3
-0.2
-0.1
buoyancy on lipid accumulation
40 hrs Median Buoyancy
0.1
-0.1
-0.6
-0.0
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.6
-0.0
-0.0
0.0
growth on ricinoleic acid
YNB Glucose
0.0
-0.6
-0.0
0.0
auxotrophy
YNB Glucose 75mM Arginine
0.2
-0.5
-0.1
-0.1
facs on lipid accumulation
Sorted No BODIPY Gate
-0.2
-0.0
-0.2
-0.0
growth on oleic acid
YNB Oleic Acid
-0.4
-0.2
0.3
-0.0
facs on lipid accumulation
Sorted Low BODIPY Gate
0.3
-1.0
0.2
0.2
auxotrophy
YNB Glucose
0.4
-0.4
-0.2
-0.1
growth on oleic acid
YNB Glucose
0.2
-0.4
0.1
-0.1
auxotrophy
YNB Glucose 75mM Methionine
0.5
-0.3
-0.2
-0.1
auxotrophy
Dropout Complete
0.6
-0.3
-0.2
-0.2
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
0.8
0.1
-0.2
-0.3
buoyancy on lipid accumulation
40 hrs High Buoyancy
0.4
0.1
-0.3
0.4
buoyancy on lipid accumulation
40 hrs Low Buoyancy
1.0
0.1
-0.4
-0.0
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