Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_5557: 13925 - K09008 NDUFAF3 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3, at 375495 to 376430 13925 mRNA_5558: 13926 - KOG3328 HGG motif-containing thioesterase, at 376866 to 377685 13926 mRNA_5559: 13927 - KOG2406 MADS box transcription factor, at 377772 to 380881 13927 mRNA_5560: 13928 - BLAST PROTEIN D2013.6 [Ceraceosorus bombacis], at 380962 to 381944 13928 mRNA_5561: 13929 - Hypothetical Protein, at 382634 to 383572 13929
Group Condition mRNA_5557 mRNA_5558 mRNA_5559 mRNA_5560 mRNA_5561
13925
13926
13927
13928
13929
ypd buoyancy 40 hrs No Buoyancy Separation 0.2 0.0   -3.0 -2.2
facs on lipid accumulation Sorted High BODIPY Gate -0.9 -0.9   -1.5 -0.1
growth on ricinoleic acid YNB Methylricinoleic Acid -2.0 0.3   -0.9 -0.4
growth on ricinoleic acid YNB Ricinoleic Acid -2.0 -0.1   -0.6 -0.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy -1.0 -0.5   0.1 -0.1
growth on oleic acid YNB Oleic Acid -0.8 0.1   -0.4 -0.2
facs on lipid accumulation Sorted No BODIPY Gate -0.4 -0.6   -0.2 -0.0
ypd buoyancy 40 hrs Low Buoyancy -0.7 0.1   -0.4 -0.1
growth on ricinoleic acid YNB Glucose -0.8 0.2   0.0 -0.6
facs on lipid accumulation Sorted Low BODIPY Gate 0.7 -0.8   0.3 -1.0
auxotrophy YNB Glucose -0.3 -0.4   0.4 -0.4
growth on ypd YPD 0.5 -0.3   -0.8 -0.1
auxotrophy YNB Glucose 75mM Arginine -0.2 -0.0   0.2 -0.5
ypd buoyancy 40 hrs Median Buoyancy 0.1 -0.0   -0.5 -0.1
growth on oleic acid YNB Glucose -0.3 0.0   0.2 -0.4
auxotrophy Dropout Complete -0.2 -0.2   0.6 -0.3
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.3 -0.2   0.4 0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.1 -0.7   0.8 0.1
ypd buoyancy 40 hrs High Buoyancy 0.2 0.4   -0.2 -0.3
auxotrophy YNB Glucose 75mM Methionine -0.1 -0.0   0.5 -0.3
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.7 -0.4   1.0 0.1
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