Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_5556: 13924 - KOG4580 Component of vacuolar transporter chaperone (Vtc) involved in vacuole fusion, at 374231 to 375171 13924 mRNA_5557: 13925 - K09008 NDUFAF3 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3, at 375495 to 376430 13925 mRNA_5558: 13926 - KOG3328 HGG motif-containing thioesterase, at 376866 to 377685 13926 mRNA_5559: 13927 - KOG2406 MADS box transcription factor, at 377772 to 380881 13927 mRNA_5560: 13928 - BLAST PROTEIN D2013.6 [Ceraceosorus bombacis], at 380962 to 381944 13928
Group Condition mRNA_5556 mRNA_5557 mRNA_5558 mRNA_5559 mRNA_5560
13924
13925
13926
13927
13928
facs on lipid accumulation Sorted High BODIPY Gate   -0.9 -0.9   -1.5
growth on ricinoleic acid YNB Ricinoleic Acid   -2.0 -0.1   -0.6
ypd buoyancy 40 hrs No Buoyancy Separation   0.2 0.0   -3.0
growth on ricinoleic acid YNB Methylricinoleic Acid   -2.0 0.3   -0.9
buoyancy on lipid accumulation 40 hrs Median Buoyancy   -1.0 -0.5   0.1
facs on lipid accumulation Sorted No BODIPY Gate   -0.4 -0.6   -0.2
growth on oleic acid YNB Oleic Acid   -0.8 0.1   -0.4
ypd buoyancy 40 hrs Low Buoyancy   -0.7 0.1   -0.4
growth on ypd YPD   0.5 -0.3   -0.8
growth on ricinoleic acid YNB Glucose   -0.8 0.2   0.0
ypd buoyancy 40 hrs Median Buoyancy   0.1 -0.0   -0.5
auxotrophy YNB Glucose   -0.3 -0.4   0.4
auxotrophy YNB Glucose 75mM Arginine   -0.2 -0.0   0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy   -0.3 -0.2   0.4
growth on oleic acid YNB Glucose   -0.3 0.0   0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation   -0.1 -0.7   0.8
facs on lipid accumulation Sorted Low BODIPY Gate   0.7 -0.8   0.3
auxotrophy Dropout Complete   -0.2 -0.2   0.6
auxotrophy YNB Glucose 75mM Methionine   -0.1 -0.0   0.5
ypd buoyancy 40 hrs High Buoyancy   0.2 0.4   -0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy   0.7 -0.4   1.0
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