Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_5554: 13922 - KOG0979 Structural maintenance of chromosome protein SMC5/Spr18, SMC superfamily, at 364686 to 369253 13922 mRNA_5555: 13923 - K19984 EXOC5, SEC10 exocyst complex component 5, at 369453 to 373843 13923 mRNA_5556: 13924 - KOG4580 Component of vacuolar transporter chaperone (Vtc) involved in vacuole fusion, at 374231 to 375171 13924 mRNA_5557: 13925 - K09008 NDUFAF3 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3, at 375495 to 376430 13925 mRNA_5558: 13926 - KOG3328 HGG motif-containing thioesterase, at 376866 to 377685 13926
Group Condition mRNA_5554 mRNA_5555 mRNA_5556 mRNA_5557 mRNA_5558
13922
13923
13924
13925
13926
buoyancy on lipid accumulation 40 hrs Median Buoyancy   -0.3   -1.0 -0.5
facs on lipid accumulation Sorted High BODIPY Gate   0.1   -0.9 -0.9
facs on lipid accumulation Sorted Low BODIPY Gate   -1.2   0.7 -0.8
auxotrophy YNB Glucose   -0.5   -0.3 -0.4
facs on lipid accumulation Sorted No BODIPY Gate   -0.2   -0.4 -0.6
buoyancy on lipid accumulation 40 hrs High Buoyancy   -0.6   -0.3 -0.2
growth on ricinoleic acid YNB Ricinoleic Acid   1.2   -2.0 -0.1
auxotrophy Dropout Complete   -0.6   -0.2 -0.2
auxotrophy YNB Glucose 75mM Methionine   -0.7   -0.1 -0.0
auxotrophy YNB Glucose 75mM Arginine   -0.4   -0.2 -0.0
buoyancy on lipid accumulation 40 hrs Low Buoyancy   -0.8   0.7 -0.4
growth on ricinoleic acid YNB Methylricinoleic Acid   1.3   -2.0 0.3
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation   0.3   -0.1 -0.7
ypd buoyancy 40 hrs Low Buoyancy   0.4   -0.7 0.1
ypd buoyancy 40 hrs Median Buoyancy   -0.1   0.1 -0.0
growth on oleic acid YNB Oleic Acid   0.9   -0.8 0.1
growth on oleic acid YNB Glucose   0.5   -0.3 0.0
growth on ricinoleic acid YNB Glucose   0.9   -0.8 0.2
ypd buoyancy 40 hrs High Buoyancy   0.0   0.2 0.4
growth on ypd YPD   0.6   0.5 -0.3
ypd buoyancy 40 hrs No Buoyancy Separation   1.1   0.2 0.0
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