Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_5553: 13921 - K20791 NAA10_11, ARD1_2 N-alpha-acetyltransferase 10/11, at 363195 to 364083 13921 mRNA_5554: 13922 - KOG0979 Structural maintenance of chromosome protein SMC5/Spr18, SMC superfamily, at 364686 to 369253 13922 mRNA_5555: 13923 - K19984 EXOC5, SEC10 exocyst complex component 5, at 369453 to 373843 13923 mRNA_5556: 13924 - KOG4580 Component of vacuolar transporter chaperone (Vtc) involved in vacuole fusion, at 374231 to 375171 13924 mRNA_5557: 13925 - K09008 NDUFAF3 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3, at 375495 to 376430 13925
Group Condition mRNA_5553 mRNA_5554 mRNA_5555 mRNA_5556 mRNA_5557
13921
13922
13923
13924
13925
buoyancy on lipid accumulation 40 hrs Median Buoyancy     -0.3   -1.0
facs on lipid accumulation Sorted High BODIPY Gate     0.1   -0.9
auxotrophy YNB Glucose     -0.5   -0.3
growth on ricinoleic acid YNB Ricinoleic Acid     1.2   -2.0
buoyancy on lipid accumulation 40 hrs High Buoyancy     -0.6   -0.3
auxotrophy YNB Glucose 75mM Methionine     -0.7   -0.1
auxotrophy Dropout Complete     -0.6   -0.2
growth on ricinoleic acid YNB Methylricinoleic Acid     1.3   -2.0
auxotrophy YNB Glucose 75mM Arginine     -0.4   -0.2
facs on lipid accumulation Sorted No BODIPY Gate     -0.2   -0.4
facs on lipid accumulation Sorted Low BODIPY Gate     -1.2   0.7
ypd buoyancy 40 hrs Low Buoyancy     0.4   -0.7
buoyancy on lipid accumulation 40 hrs Low Buoyancy     -0.8   0.7
ypd buoyancy 40 hrs Median Buoyancy     -0.1   0.1
growth on oleic acid YNB Oleic Acid     0.9   -0.8
growth on ricinoleic acid YNB Glucose     0.9   -0.8
growth on oleic acid YNB Glucose     0.5   -0.3
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation     0.3   -0.1
ypd buoyancy 40 hrs High Buoyancy     0.0   0.2
growth on ypd YPD     0.6   0.5
ypd buoyancy 40 hrs No Buoyancy Separation     1.1   0.2
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